PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Araip.F678S | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | WRKY | ||||||||
Protein Properties | Length: 180aa MW: 20670.9 Da PI: 6.3934 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 34.6 | 3.9e-11 | 149 | 170 | 1 | 22 |
---SS-EEEEEEE--TT-SS-E CS WRKY 1 ldDgynWrKYGqKevkgsefpr 22 ldDgy+WrKYGqK vk+s +pr Araip.F678S 149 LDDGYRWRKYGQKAVKNSMYPR 170 59*******************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 4.1E-12 | 134 | 171 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 4.18E-9 | 143 | 171 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 12.358 | 144 | 170 | IPR003657 | WRKY domain |
SMART | SM00774 | 1.8E-4 | 149 | 180 | IPR003657 | WRKY domain |
Pfam | PF03106 | 2.8E-7 | 150 | 171 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 180 aa Download sequence Send to blast |
MENQDPSPPQ LLLPPPQQDH HHSHNDNNIH DESQYNPLFF LPPPPSPSSS IMMMQNPLVQ 60 ENIDWVSFLS NGENNNLFIG DNHNTNKETT MECASSFYAS TSTSTTSMPS LMTEVHQSGE 120 DEKKKGGRLM KKKTKPRFAF QTRSVDDILD DGYRWRKYGQ KAVKNSMYPR YTDDYSNIKI |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Araip.F678S |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016179808.1 | 1e-125 | probable WRKY transcription factor 24 | ||||
Refseq | XP_025635253.1 | 1e-125 | probable WRKY transcription factor 24 | ||||
TrEMBL | A0A445EIJ7 | 2e-80 | A0A445EIJ7_ARAHY; Uncharacterized protein | ||||
STRING | XP_007135144.1 | 3e-31 | (Phaseolus vulgaris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF3227 | 34 | 71 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G46130.2 | 3e-19 | WRKY DNA-binding protein 43 |