PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Araip.ERP3F | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | G2-like | ||||||||
Protein Properties | Length: 315aa MW: 34397.2 Da PI: 6.9064 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 106 | 2.1e-33 | 42 | 96 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWt++LHerFv+av+qLGG+ kAtPk+i+++m+vkgLtl h+kSHLQkYRl Araip.ERP3F 42 KPRLRWTQDLHERFVDAVTQLGGASKATPKAIMRTMNVKGLTLFHLKSHLQKYRL 96 79****************************************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 5.5E-32 | 39 | 97 | IPR009057 | Homeodomain-like |
PROSITE profile | PS51294 | 9.569 | 39 | 99 | IPR017930 | Myb domain |
TIGRFAMs | TIGR01557 | 7.8E-24 | 42 | 97 | IPR006447 | Myb domain, plants |
SuperFamily | SSF46689 | 1.29E-16 | 42 | 98 | IPR009057 | Homeodomain-like |
Pfam | PF00249 | 2.1E-7 | 44 | 95 | IPR001005 | SANT/Myb domain |
Pfam | PF14379 | 3.8E-15 | 138 | 184 | IPR025756 | MYB-CC type transcription factor, LHEQLE-containing domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0010628 | Biological Process | positive regulation of gene expression | ||||
GO:0016036 | Biological Process | cellular response to phosphate starvation | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 315 aa Download sequence Send to blast |
MYPRLIHPHE AGLVGQEDVQ VGGASNLTHK GDPCLVLTAD PKPRLRWTQD LHERFVDAVT 60 QLGGASKATP KAIMRTMNVK GLTLFHLKSH LQKYRLGKQS GKDMGEGCKD GLSGSYLESP 120 GTDNSSPKLP TSDTNEGFEI KEALRAQMEV QSKLHLQVEA EKHLQIRQDA EQRYMVMLER 180 ACKMLADQFI GATVIDTDNQ KFQGVGSKTP RGPMVDPLGF FSMPSTEVAG VNVPEEELPH 240 SLPPQRADCS TESCLTSHET TGGLILEGSP GEGKRRLLGM DSMAAPLIWT EAKMRTQAIN 300 VAQGNPHGIT RYAGM |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6j4r_A | 1e-18 | 42 | 98 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_B | 1e-18 | 42 | 98 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_C | 1e-18 | 42 | 98 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_D | 1e-18 | 42 | 98 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
Search in ModeBase |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00378 | DAP | Transfer from AT3G24120 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Araip.ERP3F |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016197621.1 | 0.0 | protein PHR1-LIKE 2 isoform X1 | ||||
Refseq | XP_016197622.1 | 0.0 | protein PHR1-LIKE 2 isoform X1 | ||||
Refseq | XP_025646122.1 | 0.0 | protein PHR1-LIKE 2 isoform X1 | ||||
Refseq | XP_025646123.1 | 0.0 | protein PHR1-LIKE 2 isoform X1 | ||||
TrEMBL | A0A444ZDC9 | 0.0 | A0A444ZDC9_ARAHY; Uncharacterized protein | ||||
TrEMBL | A0A445DJE3 | 0.0 | A0A445DJE3_ARAHY; Uncharacterized protein | ||||
STRING | GLYMA15G12930.1 | 0.0 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF6618 | 33 | 49 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G24120.1 | 3e-64 | G2-like family protein |