PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.ELZ5A
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family Trihelix
Protein Properties Length: 462aa    MW: 52921.8 Da    PI: 7.979
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.ELZ5AgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix48.22.8e-151191673787
     trihelix  37 kmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 
                   + e+g++rs k+C+ek+enl k+ykk+keg+ +r  ++ +++++f+qlea
  Araip.ELZ5A 119 GCLEHGYQRSGKKCREKFENLYKYYKKTKEGKAGR--QDGKHYRFFRQLEA 167
                  589******************************98..55667*******85 PP
2trihelix43.86.8e-14360435273
     trihelix   2 WtkqevlaLiearrem.eerlrr...gklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrts 73 
                  W++ e+  L+++r em e+++r    g+++++lWe+++ km+  g+e+sp++ kekwe ++k+  k k+ e++ +s
  Araip.ELZ5A 360 WQECEISRLVQLRAEMmETSFRHggdGCSEEALWEQIATKMACFGYEKSPVKLKEKWETISKENNKKKRKENNSNS 435
                  *************987255566444479***********************************9999988887543 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138372.7E-9121168No hitNo description
PfamPF138375.7E-12358435No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009909Biological Processregulation of flower development
GO:0010200Biological Processresponse to chitin
GO:0046621Biological Processnegative regulation of organ growth
GO:0048442Biological Processsepal development
GO:0048498Biological Processestablishment of petal orientation
GO:0090428Biological Processperianth development
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0042803Molecular Functionprotein homodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 462 aa     Download sequence    Send to blast
MEDHHHQHQQ YGGITDLRQL VSNNGPRSTH FPTSIPPQPT AELFPGHPNL AAAHQQQHYE  60
LMMFGRQVAD LMPRCLHDFA DASNNNTSSI GVATATTPTT TTSASTPPLS GLGGAEAVGC  120
LEHGYQRSGK KCREKFENLY KYYKKTKEGK AGRQDGKHYR FFRQLEALYG ESNSNNSNAA  180
SAQETNFGGS NTLHYQNNPH AFNSQHQMNN QEMLLLGSQN SLSLTNSTEF ETSSSDDDDH  240
NSTGGVKGND ESMEKRRKKR GGSKSWKVKI KDFIDLQMRK LVQKQEEWLD KLMKTLEQKE  300
KERVLREEEW RRQEAARLER EHKFWAKERA WIEARDAALM EALHKLTGTD QDHNEDDENW  360
QECEISRLVQ LRAEMMETSF RHGGDGCSEE ALWEQIATKM ACFGYEKSPV KLKEKWETIS  420
KENNKKKRKE NNSNSVRSGN NNHLRIPTLM HQFIKLRTVS HS
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that prevents growth. Regulates perianth architecture in flower, mostly in the second whorl, probably by suppressing growth between initiating sepals, ensuring that they remain separate, and by modulating organ shapes. Required for the establishment of auxin flux. {ECO:0000269|PubMed:10572040, ECO:0000269|PubMed:15269176, ECO:0000269|PubMed:18080804}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.ELZ5A
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Expression within the newly arising sepals is repressed via the PINOID auxin-response pathway. {ECO:0000269|PubMed:15269176}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150411e-40AP015041.1 Vigna angularis var. angularis DNA, chromosome 8, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025657885.10.0trihelix transcription factor PTL
SwissprotQ9LZS01e-76PTL_ARATH; Trihelix transcription factor PTL
TrEMBLA0A444YPF90.0A0A444YPF9_ARAHY; Uncharacterized protein
STRINGGLYMA19G37660.11e-172(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF20223489
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03680.17e-55Trihelix family protein
Publications ? help Back to Top
  1. Quon T,Lampugnani ER,Smyth DR
    PETAL LOSS and ROXY1 Interact to Limit Growth Within and between Sepals But to Promote Petal Initiation in Arabidopsis thaliana.
    Front Plant Sci, 2017. 8: p. 152
    [PMID:28228771]