PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.EC2BK
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family Trihelix
Protein Properties Length: 513aa    MW: 57963.1 Da    PI: 5.8636
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.EC2BKgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix91.31e-28349438185
     trihelix   1 rWtkqevlaLiearr......emeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdql 85 
                  rW+k+evlaLi++r       + +e+ r++ ++ plWe++s+ m e g++rs+k+Ckekwen+nk+++k+k+ +kkr s +s+tcpyf+ l
  Araip.EC2BK 349 RWPKDEVLALINLRCntqvssNNDENGRETHKALPLWERISQGMVELGYTRSAKRCKEKWENINKYFRKTKDANKKR-SLDSRTCPYFHLL 438
                  8*************9444444444444456699*******************************************8.9999******987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd122038.79E-23348419No hitNo description
PfamPF138373.1E-19348440No hitNo description
PROSITE profilePS500906.423349412IPR017877Myb-like domain
Sequence ? help Back to Top
Protein Sequence    Length: 513 aa     Download sequence    Send to blast
MAELGYKRSA EKCKEKFEEE SRYFSSNINF TNKTITPPPT TTTGYRFLSE LEELYHQQDN  60
SDHHHQQEVV VVEKQPSSTE GQEDKVVMDQ ALGEDDKEND EEVVAGAATV VLPEKIITTK  120
TKERKRKRGG GDGDGNGDRV RFEMFKGFCE SIVHKMMEQQ EEMHNKLIED MVRRDEEKLA  180
REEAWKKQEV ERMNKELEIM QQEQAIAGDR QANIIEFLKK FAPEIQTLVC VEEDHDDHNN  240
NGRNKLVKVT NSNNNVEHNG SNLLLHSQNP NPPSSPSSSS AVILNNQNGV FVAAASSSTN  300
PSSSPMIQAG KNPNSTYLNN DSPIVEADSA AKKAAATTAN CEKDEIGRRW PKDEVLALIN  360
LRCNTQVSSN NDENGRETHK ALPLWERISQ GMVELGYTRS AKRCKEKWEN INKYFRKTKD  420
ANKKRSLDSR TCPYFHLLSS LYSQGKLLLQ PEKQETTTNN NDNHGKKIVT DHQTSSHQMG  480
SAIAADDNHD HGGENNNNNK ALMQAPSLDF DQF
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.EC2BK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEF2217545e-49EF221754.1 Glycine max trihelix transcription factor (GT-2B) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025675654.10.0trihelix transcription factor GTL2
TrEMBLA0A444XN720.0A0A444XN72_ARAHY; Uncharacterized protein
STRINGXP_007144820.11e-130(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF50433355
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28300.17e-43Trihelix family protein