PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Araip.DI7AJ | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | G2-like | ||||||||
Protein Properties | Length: 142aa MW: 16007.2 Da PI: 11.2066 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 103.7 | 1.1e-32 | 36 | 89 | 2 | 55 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr++Wtp+LH++F++a+++LGG ++AtPk +++lm+vkg+t++hvkSHLQ+YR+ Araip.DI7AJ 36 PRICWTPDLHRCFLHAIQRLGGVDRATPKMVMQLMNVKGVTISHVKSHLQMYRS 89 8****************************************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51294 | 9.39 | 32 | 92 | IPR017930 | Myb domain |
Gene3D | G3DSA:1.10.10.60 | 5.7E-31 | 32 | 90 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 2.51E-16 | 34 | 92 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 2.1E-24 | 36 | 89 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 1.3E-5 | 39 | 88 | IPR001005 | SANT/Myb domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 142 aa Download sequence Send to blast |
MKSEDERVLI IVKASPTTTL SLKAPMVRPY VRSRMPRICW TPDLHRCFLH AIQRLGGVDR 60 ATPKMVMQLM NVKGVTISHV KSHLQMYRSV KQEEMKQGGT VNRVFCKGAV VELVIIPKNL 120 LAPNSKIFGM SSSSKSLRIM QS |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6j4k_A | 2e-18 | 37 | 91 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4k_B | 2e-18 | 37 | 91 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_A | 3e-18 | 37 | 91 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_B | 3e-18 | 37 | 91 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_C | 3e-18 | 37 | 91 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_D | 3e-18 | 37 | 91 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_A | 2e-18 | 37 | 91 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_C | 2e-18 | 37 | 91 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_D | 2e-18 | 37 | 91 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_F | 2e-18 | 37 | 91 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_H | 2e-18 | 37 | 91 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_J | 2e-18 | 37 | 91 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Araip.DI7AJ |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016196431.1 | 4e-59 | putative Myb family transcription factor At1g14600 | ||||
Refseq | XP_025644808.1 | 4e-59 | putative Myb family transcription factor At1g14600 | ||||
TrEMBL | A0A444ZCP9 | 8e-58 | A0A444ZCP9_ARAHY; Uncharacterized protein | ||||
STRING | XP_007147718.1 | 4e-43 | (Phaseolus vulgaris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF9381 | 28 | 40 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G40260.1 | 6e-33 | G2-like family protein |