PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Araip.BVG6R

Organism

Arachis ipaensis

Taxonomic ID

130454

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

G2-like

Protein Properties

Length: 487aa MW: 53483.2 Da PI: 9.3854

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Araip.BVG6R	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	34.1	6e-11	175	200	1	26
G2-like 1 kprlrWtpeLHerFveaveqLGGsek 26 k+r++W++eLH+rF++a++qLGG++ Araip.BVG6R 175 KQRRCWSQELHKRFLHALQQLGGADS 200 79*********************986 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	1.8E-8	173	201	IPR009057	Homeodomain-like

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 487 aa Download sequence Send to blast
MSLGQSECSE QTSTDDPVFE EFIPIKKRAS PDCDEEDDEE YYDDGEEQHS HRNKIQKEDS 60 TNNNNNNSSC STDKKKSDWL RSVQLWNPDP QPPKEDVPRK ASVVEVKRSI GGAFQPFHRE 120 ESTVGKVNAS SSSLPTAKTP SSPPVPATSS TGPVSTGGNA GSGGKREEKG QGQRKQRRCW 180 SQELHKRFLH ALQQLGGADS CFSSQTPLQL TTPSSLSLTF SLGQRMTEPA SKPNGNGAIN 240 GTAAAPAVNG NQGPVKSQLY NPNRQVYRPQ SHYHRRHRSG RSICCCCCFW TILIILAAAL 300 LAAIVGAALY VLYRPHQPQF SITNLRIARM NLTTSTDSPS HLTTLFNLTL IAKNPNNHLV 360 FFYDPFTVTA LSDSVFIGNG SLTAFESDKN NQTSLRAVVS GSQDLDTESL STMRSALKKK 420 KGFPVVIQMD TKVKMRMEWL KSKKVGIRVT CDGIRGTVPA GKSPAVASVI DSQCKVDLRI 480 KIWKFSF

Sequence ? help Back to Top

Protein Sequence Length: 487 aa Download sequence Send to blast

MSLGQSECSE QTSTDDPVFE EFIPIKKRAS PDCDEEDDEE YYDDGEEQHS HRNKIQKEDS  60
TNNNNNNSSC STDKKKSDWL RSVQLWNPDP QPPKEDVPRK ASVVEVKRSI GGAFQPFHRE  120
ESTVGKVNAS SSSLPTAKTP SSPPVPATSS TGPVSTGGNA GSGGKREEKG QGQRKQRRCW  180
SQELHKRFLH ALQQLGGADS CFSSQTPLQL TTPSSLSLTF SLGQRMTEPA SKPNGNGAIN  240
GTAAAPAVNG NQGPVKSQLY NPNRQVYRPQ SHYHRRHRSG RSICCCCCFW TILIILAAAL  300
LAAIVGAALY VLYRPHQPQF SITNLRIARM NLTTSTDSPS HLTTLFNLTL IAKNPNNHLV  360
FFYDPFTVTA LSDSVFIGNG SLTAFESDKN NQTSLRAVVS GSQDLDTESL STMRSALKKK  420
KGFPVVIQMD TKVKMRMEWL KSKKVGIRVT CDGIRGTVPA GKSPAVASVI DSQCKVDLRI  480
KIWKFSF

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Araip.BVG6R

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015935198.1	0.0	NDR1/HIN1-like protein 13
Refseq	XP_016163845.1	0.0	NDR1/HIN1-like protein 13
Refseq	XP_016163846.1	0.0	NDR1/HIN1-like protein 13
Refseq	XP_025613427.1	0.0	NDR1/HIN1-like protein 13
Refseq	XP_025666993.1	0.0	NDR1/HIN1-like protein 13
TrEMBL	A0A445C8U3	0.0	A0A445C8U3_ARAHY; Uncharacterized protein
STRING	XP_007136830.1	1e-158	(Phaseolus vulgaris)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25550.1	4e-24	G2-like family protein