PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.BTW87
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family C2H2
Protein Properties Length: 344aa    MW: 37334 Da    PI: 6.602
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.BTW87genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.26.3e-05101123123
                  EEETTTTEEESSHHHHHHHHHHT CS
      zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                  y C+ C+ksFs+   L  H++ H
  Araip.BTW87 101 YNCTFCDKSFSSAQALGGHQNGH 123
                  89*****************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576674.63E-699128No hitNo description
PROSITE profilePS5015711.468101128IPR007087Zinc finger, C2H2
PfamPF139124.8E-6101120IPR007087Zinc finger, C2H2
Gene3DG3DSA:3.30.160.607.0E-4101126IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
PROSITE patternPS000280103123IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003676Molecular Functionnucleic acid binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 344 aa     Download sequence    Send to blast
MSNNNVSSSP ANQPEKKGKE KVNFDEMNKD KGILVNESNV PNNMNNKRKA IVLGDDHDNP  60
NTDGSAAVTE DGSDSTKEQE PNSDKTIVIG SQNSQKKKIW YNCTFCDKSF SSAQALGGHQ  120
NGHRMERMQR SHNNNNSGND GIQLLNNMTM GVGMNSSSST SSMELPSSPT IPSFRPFFNG  180
EPNMMIMGYN INNDYHPYHH GLFQNNGGRP SNFFSPGPVV GANNNFTYPR VGSAFGAVGV  240
GNVGAFQHPY EFRTRVGLND AASVNPGPGG TSQHPRPPVA AVEIRGARIG NINNNNNGGV  300
QRQIVNEACE TPQGEFEFVL LPCAARNNDM VEIDFGLVPK KDEN
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.BTW87
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020961473.10.0GATA zinc finger domain-containing protein 14-like isoform X1
RefseqXP_025663379.10.0GATA zinc finger domain-containing protein 14-like
TrEMBLA0A444YQ230.0A0A444YQ23_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1627936
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G01860.13e-08C2H2 family protein