PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.BS40A
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family TALE
Protein Properties Length: 742aa    MW: 81699.2 Da    PI: 7.5535
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.BS40AgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox28.62.4e-095405771954
                  HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
     Homeobox  19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                  Fe   ++yp+ +++  LAk++gL+ +qV++WF N R +
  Araip.BS40A 540 FEHflHPYPTDTDKLMLAKQTGLSRSQVSNWFINARVR 577
                  554459******************************88 PP
2BELL100.41.4e-32414480672
         BELL   6 qkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 
                   +kk++Ll++l+eV++rY+qy++q+++v+ sFe v gl +a+pY+slA k++S+hFrcLk+ai++q+
  Araip.BS40A 414 SRKKSRLLTMLDEVYRRYRQYYQQMHAVVTSFEYVSGLTNAAPYASLAIKTMSKHFRCLKNAITDQL 480
                  579*************************************************************997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM005743.1E-40331478IPR006563POX domain
PfamPF075264.2E-38336477IPR006563POX domain
PROSITE profilePS5007112.098518581IPR001356Homeobox domain
CDDcd000861.06E-12521582No hitNo description
SMARTSM003893.4E-10521585IPR001356Homeobox domain
SuperFamilySSF466896.42E-17523588IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.4E-27524585IPR009057Homeodomain-like
PfamPF059201.4E-18538577IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010051Biological Processxylem and phloem pattern formation
GO:0010076Biological Processmaintenance of floral meristem identity
GO:0010077Biological Processmaintenance of inflorescence meristem identity
GO:0010089Biological Processxylem development
GO:0010154Biological Processfruit development
GO:0010223Biological Processsecondary shoot formation
GO:0010228Biological Processvegetative to reproductive phase transition of meristem
GO:0045892Biological Processnegative regulation of transcription, DNA-templated
GO:0048457Biological Processfloral whorl morphogenesis
GO:0048645Biological Processorgan formation
GO:0080006Biological Processinternode patterning
GO:0005634Cellular Componentnucleus
GO:0005829Cellular Componentcytosol
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 742 aa     Download sequence    Send to blast
LLLLKRKAFI FLSFIFWLLL NFVFYFYPFM AEEGFEGYHV PQQSRRDKLR VVVAHNQQHH  60
HQQTTTLLES SSTPPTTTTS TSWYDPSSFI PSDLLTCAAA TQQGHHGNFH LNNEPSKPNN  120
TTNLFASSSA VKQEEQQRSG LMMMGFGVVT AINNGSSSSS SSPSSNSSSV SLSHHHAYMD  180
PQSSSTLHLN NPSIHVFGNN NNNNNNNNPL FLYQPQNLRD FDNHGGYGGG GGSGGGGEIM  240
VFKPEPLSLS LSSHNHNHGS NNNNHNSNNN GNNLPLELNL QRYGAMICGG GGGVIPGLVV  300
NSSGGGSGTS NEVSRSCSSV MVVPQMMGPF TGYASVLKGS RFLKPAQQLL EELCDVGVGV  360
VGAEDKIIVA DASLMEPPPT AASTTTPLME CLNHSHHEDP LLLADQHAAA AVESRKKSRL  420
LTMLDEVYRR YRQYYQQMHA VVTSFEYVSG LTNAAPYASL AIKTMSKHFR CLKNAITDQL  480
QFNNKTHFQL SNRKDESPRF GNNDRGPYGQ RSGFIEHQPV WRPQRGLPER AVTVLRAWLF  540
EHFLHPYPTD TDKLMLAKQT GLSRSQVSNW FINARVRLWK PMVEEIHMLE TRQAQKNTQR  600
EEHSRNKSSD PLPSDNTTLV SDNPSTSAAD KFQEAPYKRA MNELPSMAIR TQEQVNLACH  660
GNQQVGIGVS MGSASNNVSL TLGLHQNHGI GLAEPFPLSA AQRFGLGLET NNEGYVLSGF  720
ESQNRHFGRD VIGGQLLHDF VG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4xrs_A8e-16527584158Homeobox protein Meis1
4xrs_B8e-16527584158Homeobox protein Meis1
5bng_A8e-16527585159Homeobox protein Meis2
5bng_B8e-16527585159Homeobox protein Meis2
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.BS40A
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016183786.10.0BEL1-like homeodomain protein 9
TrEMBLA0A445AJI70.0A0A445AJI7_ARAHY; Uncharacterized protein
STRINGGLYMA01G25710.20.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF28103373
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G02030.11e-105TALE family protein