PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.BEJ3Y
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family Trihelix
Protein Properties Length: 429aa    MW: 49262.2 Da    PI: 4.5299
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.BEJ3YgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix39.21.8e-12199283286
     trihelix   2 WtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                  Wt++e+ +L++a  ++  + +r++l+   W ev++ + +  ++ r+ +qC+++++ l+k+ykk+           ss++ yf++++
  Araip.BEJ3Y 199 WTEHETFVLLDAWGDRFLQRERKSLRSDEWHEVAAEVsKVSKIDRTDTQCRNRIDTLKKKYKKEIMKFPAM-GVGSSKWLYFERMN 283
                  *************************************666789********************99888876.566779*****997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138376.6E-20198285No hitNo description
Gene3DG3DSA:1.10.10.600.001199262IPR009057Homeodomain-like
PROSITE profilePS500906.098199256IPR017877Myb-like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 429 aa     Download sequence    Send to blast
MDDIEDDARY PPNHYSDNHS QVYDYQELDM RGSSYSQPVP NEYPQDNNDV DEEDEEQLGE  60
DEDDGIDQRN GFRISQKDAD DNDDGEGDTD GDGDGNNHDD NQKIRNNFRL SQKDNNDDEE  120
GDTDGDGNEN DDDNNEGNDD NDNSHGNKIE DGLEWHPKKQ KLKSLVSTYE LAPRVPAPST  180
VATSSPKPSS GGRNSLTDWT EHETFVLLDA WGDRFLQRER KSLRSDEWHE VAAEVSKVSK  240
IDRTDTQCRN RIDTLKKKYK KEIMKFPAMG VGSSKWLYFE RMNKLMSPPP QQTSLSCEMQ  300
SQKHAVINSR VNLNHPNGVD KTRNSPETTE STSEDGSIGA RGKKRKKRRC NDGACSFRLL  360
ADSIHKFSKI YEKIENSKRQ QMVELERMRM DLHKELETQK RQILERMQSK IWKLEQGDDE  420
NDDSAENGM
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1342346KKRKK
2342348KKRKKRR
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.BEJ3Y
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016169722.10.0trihelix transcription factor ASIL1
TrEMBLA0A445CIJ71e-152A0A445CIJ7_ARAHY; Uncharacterized protein
STRINGGLYMA13G43651.21e-143(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF24413480
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24490.13e-59Trihelix family protein