PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Araip.B5XPZ | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | bHLH | ||||||||
Protein Properties | Length: 209aa MW: 23867 Da PI: 10.2619 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 36.2 | 1.1e-11 | 137 | 182 | 6 | 55 |
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +++Er RR ri +++ L el+P+ +k s a++L +Av YIk+Lq Araip.B5XPZ 137 SIAERVRRTRISERMKLLEELVPNM----DKQASTADMLDMAVGYIKDLQ 182 689*********************7....688*****************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 14.107 | 131 | 181 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 3.4E-15 | 134 | 197 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 1.90E-9 | 135 | 184 | No hit | No description |
Gene3D | G3DSA:4.10.280.10 | 1.1E-13 | 136 | 194 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 8.5E-9 | 137 | 182 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 1.9E-9 | 137 | 187 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 209 aa Download sequence Send to blast |
MTKGVGNYSG SDELSLSTMN RFNNQISFSS SRSPSSSATA TNNNNRNGGL FFPNYGSWNE 60 TSYKRDDQNR IHKLIFYANQ NEEFGNNKVV HTLSHQLSFP KAESEMFAME NMIHFPLSDS 120 VPCKIRAKRG CATHPRSIAE RVRRTRISER MKLLEELVPN MDKQASTADM LDMAVGYIKD 180 LQKQFKNLSD KRAKCKCIRM QKSDSSKKF |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Araip.B5XPZ |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016207457.1 | 1e-157 | transcription factor bHLH130 | ||||
Refseq | XP_025663378.1 | 1e-156 | transcription factor bHLH130 | ||||
Swissprot | Q66GR3 | 8e-50 | BH130_ARATH; Transcription factor bHLH130 | ||||
TrEMBL | A0A444YHF9 | 1e-155 | A0A444YHF9_ARAHY; Uncharacterized protein | ||||
STRING | XP_004497939.1 | 7e-66 | (Cicer arietinum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF23906 | 2 | 2 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G42280.1 | 7e-52 | bHLH family protein |
Publications ? help Back to Top | |||
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