PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.AXS1W
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 94aa    MW: 10625.1 Da    PI: 10.1823
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.AXS1WgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR1263e-084589147
         FAR1  1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk 47
                 kfY++YAk +G s+r+++++++   +ei+++  +Cs+egk +++ + 
  Araip.AXS1W 45 KFYRDYAKAAGVSTRVQSTNRE--GNEIKNQLITCSREGKWKSKISP 89
                 6****************98887..8889************9987665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031011.6E-54589IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 94 aa     Download sequence    Send to blast
MNFNLTKFLR RSGVDKNFLG PLCVVDDQFV PKVGMTFTTL EDAGKFYRDY AKAAGVSTRV  60
QSTNREGNEI KNQLITCSRE GKWKSKISPT EKTN
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.AXS1W
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHQ6371781e-82HQ637178.1 Arachis hypogaea clone AHF-205D04 NBS-LRR gene cluster, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020997160.11e-40protein FAR1-RELATED SEQUENCE 5-like
RefseqXP_020997362.12e-40protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A444Z0Q83e-50A0A444Z0Q8_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2114477