PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.A8YH6
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 444aa    MW: 48227.1 Da    PI: 4.5499
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.A8YH6genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH16.81.2e-053283651254
                  HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
          HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                  R +++ +++  L++l+ +      +K + a++L +A+eYIk L
  Araip.A8YH6 328 RKEKLGDRITALQQLVSPF-----GKTDTASVLHEAIEYIKFL 365
                  677888999*******998.....8****************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088811.973316365IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.7E-11326378IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.02E-5326369No hitNo description
Gene3DG3DSA:4.10.280.108.4E-9330373IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 444 aa     Download sequence    Send to blast
MAEEFQATIC GDNYWWNSNR SLFSLMGGSM TCSVAAANDS ANNYGSFWQG SDFMDFKGAT  60
TKSSFKEEDT DKCSNNESSI SAAVAGGTVG SIFINSTSQM MSYGLSSSPS SPWNNPSLFG  120
CNERSENNFQ SVVLQEETGL DPSSNNSQQI QQQQEFSSSM GGGFTVESSL SASHDYPLMQ  180
AGLFGSTDSS SSLFTTNQPT LPELSPIWST VSSFTKPSSF MEPKQLNGLQ FSNNTPFCNA  240
STEETLYNIR SDIFSSSSSQ PQLYQTSPTT FDNSKPNNAL TSTPLNKLKR EESPEKASSS  300
VCSKNVSGRV FKKARIETPS PLPTFKVRKE KLGDRITALQ QLVSPFGKTD TASVLHEAIE  360
YIKFLHDQVN VLTAPYMKNG SSIQDQQGCD YEKDSKCLTQ DLSSRGLCLV PVASTFPMAT  420
ETTADFWTPT FGDSLIGNVA GSHQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.A8YH6
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016182129.10.0transcription factor bHLH112
RefseqXP_025683913.10.0transcription factor bHLH112
TrEMBLA0A444WXX10.0A0A444WXX1_ARAHY; Uncharacterized protein
STRINGXP_007148280.11e-119(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF111833106
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61660.33e-50bHLH family protein