PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Araip.98Q8H

Organism

Arachis ipaensis

Taxonomic ID

130454

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

Trihelix

Protein Properties

Length: 415aa MW: 48086 Da PI: 4.4381

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Araip.98Q8H	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	43.7	7.4e-14	187	271	2	86
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 Wt++e+ +L++a ++ + +r++l+ W+ev++k+ + ++er+ qC+++++ l+k+ykk+k+ ++k s++ +++yf++++ Araip.98Q8H 187 WTERETFVLLDAWGDKFLQHGRKSLRSEEWQEVGEKVsKVSKIERKDAQCRNRLDTLKKKYKKEKAKSEKMGSGT-CKWVYFQRMD 271 ***********************************666789**********************985555.59*****8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF13837	7.8E-20	186	273	No hit	No description

Sequence ? help Back to Top
Protein Sequence Length: 415 aa Download sequence Send to blast
MDGTEDDDLR YPSNPYGVNH QGYGYLSHRR LPVRTSQYIQ PVANDFVEHN DNANDNEEEK 60 EDEEDEDEEQ IIEEDHDDGD DVDSQRNAVP NNVEEGDDED RDGDEIGGNN DDGEEEDDEE 120 DEEDDDDAKP KIYSMKVDDD MEWHPKKRKL KSLISAYEFA PRVPAPSAAA PSTPKPSSGG 180 RNSLTDWTER ETFVLLDAWG DKFLQHGRKS LRSEEWQEVG EKVSKVSKIE RKDAQCRNRL 240 DTLKKKYKKE KAKSEKMGSG TCKWVYFQRM DKLMSSPAQQ SGLSCGLDSG EYVFTNPRVY 300 LNRANGFDQM RDSPGNSESF GEQGSNGHKH KKRRYARYSD YDASSFRLLA NSIQKFGEIY 360 EKIESSRRQQ MVELEKMRME FHKDLETQKR QILERIQSEI SKLHQRDDDE EENDD

Sequence ? help Back to Top

Protein Sequence Length: 415 aa Download sequence Send to blast

MDGTEDDDLR YPSNPYGVNH QGYGYLSHRR LPVRTSQYIQ PVANDFVEHN DNANDNEEEK  60
EDEEDEDEEQ IIEEDHDDGD DVDSQRNAVP NNVEEGDDED RDGDEIGGNN DDGEEEDDEE  120
DEEDDDDAKP KIYSMKVDDD MEWHPKKRKL KSLISAYEFA PRVPAPSAAA PSTPKPSSGG  180
RNSLTDWTER ETFVLLDAWG DKFLQHGRKS LRSEEWQEVG EKVSKVSKIE RKDAQCRNRL  240
DTLKKKYKKE KAKSEKMGSG TCKWVYFQRM DKLMSSPAQQ SGLSCGLDSG EYVFTNPRVY  300
LNRANGFDQM RDSPGNSESF GEQGSNGHKH KKRRYARYSD YDASSFRLLA NSIQKFGEIY  360
EKIESSRRQQ MVELEKMRME FHKDLETQKR QILERIQSEI SKLHQRDDDE EENDD

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Araip.98Q8H

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020966329.1	0.0	trihelix transcription factor ASIL1
Refseq	XP_025677776.1	0.0	trihelix transcription factor ASIL1
TrEMBL	A0A444XC70	0.0	A0A444XC70_ARAHY; Uncharacterized protein
STRING	GLYMA13G43651.2	1e-143	(Glycine max)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF2441	34	80

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24490.1	2e-67	Trihelix family protein