PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.8I39N
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 243aa    MW: 27869.9 Da    PI: 5.2634
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.8I39NgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH44.33.2e-145497755
                 HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
          HLH  7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55
                   Er+RR+++N++++ Lr+++P+ +      K++Ka+i + A+eYI++Lq
  Araip.8I39N 54 VSERNRRKKLNERLFALRSVVPNiS------KMDKASIIKDAIEYIQKLQ 97
                 57*********************66......******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088816.7744796IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.57E-1848114IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000837.92E-1350101No hitNo description
SMARTSM003534.8E-1653102IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.108.2E-1753112IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.0E-115497IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    Send to blast
MENIGDEYHR YWETSMFLQT QELDNWGLDE ALSGYYDSSS PDGAASSAAS KNIVSERNRR  60
KKLNERLFAL RSVVPNISKM DKASIIKDAI EYIQKLQEQE RIIQSEIVEL ESGMMVEKKN  120
PNSYEFEHQE LPMLLRSKKK RTDELYDSLN SRNSPIHILE LRVTYMGEKT IVISLTCNKR  180
TDTMVKLCEI FESLKLKIIT ANITSLSSAR LLKTADEEEK DLLQIKIQTA IAALNDPLSP  240
MSI
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.8I39N
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025646881.11e-176transcription factor bHLH35 isoform X2
SwissprotQ2HIV91e-84BH035_ARATH; Transcription factor bHLH35
TrEMBLA0A445DHG11e-171A0A445DHG1_ARAHY; Uncharacterized protein
STRINGGLYMA09G06770.11e-141(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF33893369
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57150.11e-77bHLH family protein