PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Araip.80XBW

Organism

Arachis ipaensis

Taxonomic ID

130454

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

Nin-like

Protein Properties

Length: 381aa MW: 43893.4 Da PI: 10.0621

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Araip.80XBW	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	82	5.9e-26	244	293	3	52
RWP-RK 3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ++i+l++l kyF+ pi +A++ L+v+lTvLKr+CR++GI+RWPhRkiksl Araip.80XBW 244 AKITLSELVKYFDIPIVEASRRLNVGLTVLKRKCREFGIPRWPHRKIKSL 293 78**********************************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51519	19.531	228	313	IPR003035	RWP-RK domain
Pfam	PF02042	1.1E-21	245	293	IPR003035	RWP-RK domain

Sequence ? help Back to Top
Protein Sequence Length: 381 aa Download sequence Send to blast
MTRRSCTCKQ TPKPRLLSRC FSLLSPQRHC SCFVPNSDGS IFNLAMKNTL LTTLLVFKNT 60 IREELIRSVH VYQIKDGKVR EVEREFVFSE SGSYGEMRST PILRLQKKLC VAEVSEGYQN 120 GVWLCIFSFH RDHKPQFSSI PNLLLLSRNL KLRTIPTLLR DLRVIYKLEK DKDVLSDSTG 180 EERQGNNKDS QPLRKVVPVL TQDLNFLPYE DDMSESPDNK LDVQALPDAD SAEKKKRASS 240 DRVAKITLSE LVKYFDIPIV EASRRLNVGL TVLKRKCREF GIPRWPHRKI KSLDSLIHEI 300 QEEANNQESD DKAAALAAIE KRRMLESEKE NIERKPFMDI QSETKKLRQD IFKRRHRARA 360 QVKLNSTVSS SSSSNKTTIE T

Sequence ? help Back to Top

Protein Sequence Length: 381 aa Download sequence Send to blast

MTRRSCTCKQ TPKPRLLSRC FSLLSPQRHC SCFVPNSDGS IFNLAMKNTL LTTLLVFKNT  60
IREELIRSVH VYQIKDGKVR EVEREFVFSE SGSYGEMRST PILRLQKKLC VAEVSEGYQN  120
GVWLCIFSFH RDHKPQFSSI PNLLLLSRNL KLRTIPTLLR DLRVIYKLEK DKDVLSDSTG  180
EERQGNNKDS QPLRKVVPVL TQDLNFLPYE DDMSESPDNK LDVQALPDAD SAEKKKRASS  240
DRVAKITLSE LVKYFDIPIV EASRRLNVGL TVLKRKCREF GIPRWPHRKI KSLDSLIHEI  300
QEEANNQESD DKAAALAAIE KRRMLESEKE NIERKPFMDI QSETKKLRQD IFKRRHRARA  360
QVKLNSTVSS SSSSNKTTIE T

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Araip.80XBW

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016182152.1	0.0	protein RKD5 isoform X1
Refseq	XP_025683692.1	0.0	protein RKD5 isoform X1
TrEMBL	A0A445EU59	0.0	A0A445EU59_ARAHY; Uncharacterized protein
STRING	GLYMA01G36360.1	1e-156	(Glycine max)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF9646	30	42

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35590.1	1e-69	RWP-RK domain-containing protein