PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.7JY4Q
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family C2H2
Protein Properties Length: 162aa    MW: 18131 Da    PI: 9.2039
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.7JY4QgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.10.00064163123
                 EEETTTTEEESSHHHHHHHHHHT CS
      zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                 +kC+ C +sF++   L  H  +H
  Araip.7JY4Q 41 FKCKTCERSFTSFQALGGHRASH 63
                 89**********99999998887 PP
2zf-C2H211.90.0006890112123
                  EEETTTTEEESSHHHHHHHHHHT CS
      zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                  ++Cp+Cg  Fs    L  H+r+H
  Araip.7JY4Q  90 HPCPICGVEFSIGQALGGHMRKH 112
                  78********************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF139122.0E-114065IPR007087Zinc finger, C2H2
PROSITE profilePS5015710.3884168IPR007087Zinc finger, C2H2
SuperFamilySSF576673.03E-741112No hitNo description
SMARTSM003550.164163IPR015880Zinc finger, C2H2-like
PROSITE patternPS0002804363IPR007087Zinc finger, C2H2
PfamPF139126.6E-990113IPR007087Zinc finger, C2H2
PROSITE profilePS501578.74690112IPR007087Zinc finger, C2H2
SMARTSM003550.1890112IPR015880Zinc finger, C2H2-like
PROSITE patternPS00028092112IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 162 aa     Download sequence    Send to blast
MKRGREQIEV DNCLTLLSKV GESDKISSVK GKELMIDDGA FKCKTCERSF TSFQALGGHR  60
ASHKKPKLMV LGLSCHDHHL RGPNTKPRMH PCPICGVEFS IGQALGGHMR KHRVATAKDD  120
EGDGNDHHNK RLNLCLDLNL TPFENDLIKL GLMRRIPLLS FH
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.7JY4Q
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016169469.11e-116zinc finger protein ZAT12
RefseqXP_025672161.11e-116zinc finger protein ZAT12
TrEMBLA0A445BW221e-109A0A445BW22_ARAHY; Uncharacterized protein
STRINGXP_007150296.15e-51(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF31634175
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28710.11e-34C2H2 family protein