PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.7H2KA
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family Trihelix
Protein Properties Length: 381aa    MW: 43363.2 Da    PI: 4.781
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.7H2KAgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix32.62.1e-1029104277
     trihelix   2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsesss 77 
                  Wt  e l L++    +e + +++ +  ++W  ++ ++++  + r+  qC+ kw++l  +y++i+++e+++++++++
  Araip.7H2KA  29 WTVTESLILVNEIAAVEADCSTALSSYQQWNIIAGNCAALDVGRNMGQCRRKWDSLLSDYQRIRAWEEEESKKKKK 104
                  9*******************************************************************99766654 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138377.5E-728100No hitNo description
PROSITE profilePS500906.7132985IPR017877Myb-like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009506Cellular Componentplasmodesma
Sequence ? help Back to Top
Protein Sequence    Length: 381 aa     Download sequence    Send to blast
MTDTNNAKND DVDDDAVIRR TRSQAAPDWT VTESLILVNE IAAVEADCST ALSSYQQWNI  60
IAGNCAALDV GRNMGQCRRK WDSLLSDYQR IRAWEEEESK KKKKKNNARG ACSYWALKGE  120
RVRTLRLPED FDRELYRAVD GVVRAREERG EVLVESDNEE ARNEVLDVTV EIGSKRKRQR  180
SKSERHPEDK HKKCIPVESS GDQSREHDQR GCHVQMSNKN HEEELEKHDS DDEYLKDFLE  240
DKSKSKSKAE KTPKDKLEIS VKTPAEVELQ ENDDTEMPKP TCLEKVASSS REENEETMAL  300
KLVTSSSREE NEETVALKLQ ELAVKIQAIC NESADCQAAG SQNVEDYLTE FTRCQGDKLI  360
ENLATFADIV KKLCGLLQEC K
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1174179KRKRQR
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.7H2KA
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016162434.10.0trihelix transcription factor ASR3
RefseqXP_025659345.10.0trihelix transcription factor ASR3
TrEMBLA0A444YUG30.0A0A444YUG3_ARAHY; Uncharacterized protein
STRINGXP_004498559.11e-99(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF67322633
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31270.11e-45sequence-specific DNA binding transcription factors