PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.74ZFI
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family CAMTA
Protein Properties Length: 1218aa    MW: 139218 Da    PI: 5.7688
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.74ZFIgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-1161.41.7e-50111163108
         CG-1   3 kekkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcyw 100
                  + ++rwl++ ei++iL n++ ++++ e+++ p+sgsl+L++rk++ryfrkDG++w+kkkdgktvrE+he+LK g+v+vl+cyYah+een++fqrr+yw
  Araip.74ZFI  11 EAQRRWLRPAEICEILSNYKMFQIAPEPAHMPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVREAHERLKAGSVDVLHCYYAHGEENENFQRRTYW 108
                  6699********************************************************************************************** PP

         CG-1 101 lLeeelek 108
                  +L+e++++
  Araip.74ZFI 109 MLDESQQR 116
                  ****9765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5143770.6915134IPR005559CG-1 DNA-binding domain
SMARTSM010767.8E-728181IPR005559CG-1 DNA-binding domain
PfamPF038594.0E-4411116IPR005559CG-1 DNA-binding domain
PfamPF018338.8E-8614692IPR002909IPT domain
SuperFamilySSF812961.71E-17614700IPR014756Immunoglobulin E-set
Gene3DG3DSA:2.60.40.103.0E-5615688IPR013783Immunoglobulin-like fold
PROSITE profilePS5029719.014800921IPR020683Ankyrin repeat-containing domain
CDDcd002044.85E-14800909No hitNo description
Gene3DG3DSA:1.25.40.202.2E-17802916IPR020683Ankyrin repeat-containing domain
SuperFamilySSF484034.35E-17802913IPR020683Ankyrin repeat-containing domain
PfamPF127962.1E-7822916IPR020683Ankyrin repeat-containing domain
SMARTSM002480.22850879IPR002110Ankyrin repeat
PROSITE profilePS500888.71850882IPR002110Ankyrin repeat
SMARTSM0024845889918IPR002110Ankyrin repeat
SuperFamilySSF525403.19E-710121069IPR027417P-loop containing nucleoside triphosphate hydrolase
SMARTSM000151110191041IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500967.45510211049IPR000048IQ motif, EF-hand binding site
PfamPF006120.02210211040IPR000048IQ motif, EF-hand binding site
SMARTSM000150.03810421064IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500967.6210431067IPR000048IQ motif, EF-hand binding site
PfamPF006120.001110451062IPR000048IQ motif, EF-hand binding site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 1218 aa     Download sequence    Send to blast
METDIEQILI EAQRRWLRPA EICEILSNYK MFQIAPEPAH MPPSGSLFLF DRKVLRYFRK  60
DGHNWRKKKD GKTVREAHER LKAGSVDVLH CYYAHGEENE NFQRRTYWML DESQQRFSFI  120
FLSRKMKTFK YAHTGPYVGV SSWLMVICFA LPSADEKDSA TVDHILMELS HIVLVHYREV  180
KANFRGAAKE NQESLPYAQI DKLPGSTEKE IFLSCSLHPH NYQVPSHTID TTSMKSTQAT  240
EYEEAESGIS FATKANFRGA AKENQESLPY AQIDKLPGST EKEIFLSCSL HPHNYQVPSH  300
TIDTTSMKST QATEYEEAES ALNNYASSED YSFLETQHPV VEKIPDPYCP PQFISSYLIC  360
CTNCNIETIT DEQEKLCGTP GMNHIMLSQA GKIKDIHNVR LAYEPPQHLG FSMWEYILEN  420
NGRSQYMPLQ PVLPEIQPDN MGINSNPSLM RSNFTTNITK VNGKENMVQV EGNWQVMNEL  480
YEFDPQRSLE QCLIHQDKPK VLMIDDPQEK LLDAKEKIET NRSLDGIDDT NLTLKKALLD  540
GSLAEEGLKK LDSFNQWMSK ELGDVEESKT PSTFSAYWGT VENENDVDNA TIPSEVHLDT  600
YALDPSISHD QLFTIIDFSP SWAFEGSETK ILIYGQFLRS LQEAEQCKWS CMFGEVEVPA  660
NIIDNGVLSC YTPPHKTGRI PFYVTCSNRL ACSEIREFDF RDIYTQEVNN AAEQRESISD  720
NFSVRFEELL YMGHTLPQNF DPISVSEKSE LRSKISSLLR KEEDDWDKLL KLTLEKDFSP  780
QNVQEHLLQN LLKDKLLGWL LQKVIEDGKG PNVLDEGGQG VLHLAAALGY DWALQPTVIA  840
GVNVNFCDVN GWTALHWAAF CGRELTVASL ISLGAAPGVL TDPSPEHPSG RTPADLASAN  900
GHKGIAGYLA ESSISVQLLS LDMNRDTRES SGSKVVYRVQ HNTTEVNDDR LSYELSLKDS  960
LAAVCNASQA AARIHEVYRV QSFQRKQLKE YDDKFGISDE DALSLITVKP HKVGQRNEPV  1020
HAAAIRIQNK FRSWKGRKEF LMIRQRIVKI QAHVRGHQVR KNCGKIIWSV GILEKVILRW  1080
RRKGSGLRGF KLEDVPEGTM VQDTQCKEDE YDFLKEGRKQ TEERLQKALS RVKSMVQYPE  1140
ARDQYHRLLN VVTEIQENQS CINLRALYQA LHMTLKHHRS SEERREFDNL IDLETLLDED  1200
TFMLTIIAEM RRYRFKAM
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.74ZFI
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016190668.10.0calmodulin-binding transcription activator 3 isoform X3
TrEMBLA0A445DMW70.0A0A445DMW7_ARAHY; Uncharacterized protein
STRINGGLYMA05G31190.20.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF82842735
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22300.20.0signal responsive 1