PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.4YL9A
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 98aa    MW: 11502.6 Da    PI: 4.719
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.4YL9AgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR136.61.5e-114388147
         FAR1  1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk 47
                 +fYn+Y++  GFs+r+ ++ ++   g i+++tfvC+++g+re++  +
  Araip.4YL9A 43 SFYNNYSRLKGFSTRQGRKVTN-SAGDIVRYTFVCNRQGYREKKWLE 88
                 5****************99998.6677**************998655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031014.9E-94388IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 98 aa     Download sequence    Send to blast
MGIEAEEYFG DYESKDDGFD SDEGVWPDDV LRMEFNTLDE ARSFYNNYSR LKGFSTRQGR  60
KVTNSAGDIV RYTFVCNRQG YREKKWLEMA NRNGSTRL
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.4YL9A
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020959965.16e-67uncharacterized protein LOC110263248
TrEMBLA0A444YME15e-65A0A444YME1_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF9185237
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18960.17e-07FAR1-related sequence 12