PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Araip.41ZWC

Organism

Arachis ipaensis

Taxonomic ID

130454

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

FAR1

Protein Properties

Length: 126aa MW: 14658.8 Da PI: 8.8442

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Araip.41ZWC	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	22.9	2.8e-07	43	112	1	67
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk....tekerrtraetrtgCkaklk 67 +fYn YAk+ F ++s+ +++ n+ +t++ fvC ++ ++ ++ ++++ + + C+++ + Araip.41ZWC 43 SFYNLYAKMNDFAAKRSRIQRN-VNKVVTQQAFVCFRQEIHALITTLlnanRNQSLQLDVDVGQRCTCMYM 112 5***************9998.8889*********998877666433334444445555666777655 PP

Sequence ? help Back to Top
Protein Sequence Length: 126 aa Download sequence Send to blast
MCNKRVNVLD DDERSIDEIA DLKTVNFKEL TASFSRSIGC FFSFYNLYAK MNDFAAKRSR 60 IQRNVNKVVT QQAFVCFRQE IHALITTLLN ANRNQSLQLD VDVGQRCTCM YMRKQADDCN 120 LLSRRT

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Araip.41ZWC

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016198884.1	6e-20	protein FAR1-RELATED SEQUENCE 5-like
Refseq	XP_020991221.1	2e-20	protein FAR1-RELATED SEQUENCE 5-like isoform X1
Refseq	XP_020991222.1	2e-20	protein FAR1-RELATED SEQUENCE 5-like isoform X2
Refseq	XP_025649192.1	6e-20	protein FAR1-RELATED SEQUENCE 5
TrEMBL	A0A444ZLL6	5e-19	A0A444ZLL6_ARAHY; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF3613	6	39