PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Araip.377BK

Organism

Arachis ipaensis

Taxonomic ID

130454

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

Nin-like

Protein Properties

Length: 460aa MW: 50783.7 Da PI: 8.5691

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Araip.377BK	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	77.7	1.3e-24	215	264	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 +k++sl++l++yFs+++kdAAk+L vc+T+ KriCRq+GI+RWP+Rki+++ Araip.377BK 215 KKNVSLSVLQQYFSGSLKDAAKSL-VCPTTRKRICRQHGIARWPSRKINKV 264 799*******************.**********************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51519	11.866	197	286	IPR003035	RWP-RK domain
Pfam	PF02042	4.7E-22	217	264	IPR003035	RWP-RK domain

Sequence ? help Back to Top
Protein Sequence Length: 460 aa Download sequence Send to blast
MDLKTSYSDW LFSVQCLSNN KRAALTEIID VLRAVCHAHS LPLALTWIPC YYSEGIGDEA 60 SRIRIKDGRK IPGEKTVLCI EESASYINDI VVGGFVHACV KHYLEEGQGV AGKALQSNRP 120 FFYPDVKAYN LYTMQFFLPV NMNRSQEQQL LLDNLSGTMQ RKCQTLRKVS DAELYGIEGS 180 SFSCMSLTNN ETETAHNQDM EGSRKQIEKK RSPVKKNVSL SVLQQYFSGS LKDAAKSLVC 240 PTTRKRICRQ HGIARWPSRK INKVNRLKKI QTVLNSVQGV EGGLKFDPYT GGLMSGGSIN 300 QEINARKSSL FQKKCSVKHP DPAAKDAVTI SPAFGSKGKN LAVKFEDDND NDVCLLGNQL 360 LHSDMLISNS KGELKKNKAF SVGVDSKPIA KDDGGLCQEP FPVSILESSR CDVAYHSPNS 420 LVADEMETYL NGADKLGEHH NPTTSSMTDS SNGNLRIGNI

Sequence ? help Back to Top

Protein Sequence Length: 460 aa Download sequence Send to blast

MDLKTSYSDW LFSVQCLSNN KRAALTEIID VLRAVCHAHS LPLALTWIPC YYSEGIGDEA  60
SRIRIKDGRK IPGEKTVLCI EESASYINDI VVGGFVHACV KHYLEEGQGV AGKALQSNRP  120
FFYPDVKAYN LYTMQFFLPV NMNRSQEQQL LLDNLSGTMQ RKCQTLRKVS DAELYGIEGS  180
SFSCMSLTNN ETETAHNQDM EGSRKQIEKK RSPVKKNVSL SVLQQYFSGS LKDAAKSLVC  240
PTTRKRICRQ HGIARWPSRK INKVNRLKKI QTVLNSVQGV EGGLKFDPYT GGLMSGGSIN  300
QEINARKSSL FQKKCSVKHP DPAAKDAVTI SPAFGSKGKN LAVKFEDDND NDVCLLGNQL  360
LHSDMLISNS KGELKKNKAF SVGVDSKPIA KDDGGLCQEP FPVSILESSR CDVAYHSPNS  420
LVADEMETYL NGADKLGEHH NPTTSSMTDS SNGNLRIGNI

Functional Description ? help Back to Top
Source	Description
UniProt	Probable transcription factor. {ECO:0000250}.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Araip.377BK

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020971324.1	0.0	LOW QUALITY PROTEIN: protein NLP9-like
Swissprot	Q9M1B0	1e-101	NLP9_ARATH; Protein NLP9
TrEMBL	A0A445AFK5	0.0	A0A445AFK5_ARAHY; Uncharacterized protein
STRING	GLYMA12G05390.4	1e-165	(Glycine max)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF3464	34	65

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G59580.2	1e-103	Nin-like family protein