PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.2XW37
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 268aa    MW: 31270.2 Da    PI: 7.0417
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.2XW37genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR167.14.7e-21136227191
         FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 
                  +fYn+YA   GF +rk+   k k+++ i++r++vC+keg r+ +  + ++++r+ r+  r +C a+lkvk ++  g+w+v+ +++ HnH+l+p
  Araip.2XW37 136 QFYNAYACWHGFVMRKDDIVKDKESK-IICRQLVCNKEGWRNMRYLDlDNRSREARSLMRNKCPARLKVKVDYdCGRWKVSCFVESHNHDLMP 227
                  6******************9996666.****************99887889999******************989***************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031011.1E-18136227IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    Send to blast
MAFISNNFDS ALSFVVSLQK FIFLLIGAQA LVVIQLSAVA RFGALKLKRY IGLLNNWLRG  60
KIMSTHEHDV KTDSDNDLGD DFDYKSNAHD EVEDDDVDLL DSTSKNEQDC GVKRIADLMV  120
EDIWNLEFRI EDEACQFYNA YACWHGFVMR KDDIVKDKES KIICRQLVCN KEGWRNMRYL  180
DLDNRSREAR SLMRNKCPAR LKVKVDYDCG RWKVSCFVES HNHDLMPPNL CISFRPIVVS  240
LLLIKSKWRI FIILVSRRAI LWIYCILE
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.2XW37
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHQ6371770.0HQ637177.1 Arachis hypogaea clone AHF-303L13 NBS-LRR gene cluster, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016195277.11e-117protein FAR1-RELATED SEQUENCE 5-like
RefseqXP_025647506.11e-117protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A444ZHU81e-106A0A444ZHU8_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF9653634
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.12e-17FAR1-related sequence 5