PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.1E1W9
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 189aa    MW: 21722.4 Da    PI: 4.69
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.1E1W9genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH162.3e-0563981252
                 HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHH CS
          HLH 12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIk 52
                  +++iN++++ Lr ++P+      +K++Ka+i +  +e+++
  Araip.1E1W9 63 SMKQINERLFALRIVIPNI-----TKMDKASIIKDGTEHLH 98
                 589***************7.....6*******999888875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088810.33451100IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474594.06E-856112IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.7E-661112IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.01E-564105No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 189 aa     Download sequence    Send to blast
MEENSLAETC WFNILANDLL RFVYFKGNWQ LDEAFSGDYY NFTSPDSGAL SAVSKDIVFD  60
KNSMKQINER LFALRIVIPN ITKMDKASII KDGTEHLHEK ERRIQDEIME VKSKRLNNPI  120
ITASAAAGDY DFEQDLPIVI RSKKKRPDNL FFDTSTSSSS INNTNYFPIE LIDLYAQLGS  180
SWQECKNEN
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.1E1W9
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016178136.14e-72transcription factor bHLH35
RefseqXP_025630817.14e-72transcription factor bHLH35
TrEMBLA0A445AUT44e-71A0A445AUT4_ARAHY; Uncharacterized protein
STRINGXP_002518255.11e-39(Ricinus communis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF3021222
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57150.34e-25bHLH family protein