PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.07856
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 451aa    MW: 51213.5 Da    PI: 5.3254
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.07856genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.81e-09260301854
                  HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
          HLH   8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                   Er+RR ++  +f+ L+el+P++     +K++ a+++  A++YIk+L
  Araip.07856 260 TERQRRVDLGGKFDALKELIPSS-----TKNDRASVVGDAIDYIKEL 301
                  6*********************9.....9****************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088813.687252301IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003537.1E-9258307IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.53E-12258319IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.1E-7260301IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.104.8E-10260316IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000834.71E-8261305No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 451 aa     Download sequence    Send to blast
MQLFLSTTNI VVDSFDEEVT IIGQNQQMEN NIGNYLNTLL VEEYDANSNN NHSTYTTIST  60
STHHDQNSFD HYYSNMNNNN NTNNIQFPCF PTQTTDLLNL LHFPTSPKNS SISFENHNNN  120
IITCLPNPSS SSSNIIVGQE SSNFSNVFND PLLHLNLQAP PLLHQSSSSM RELFHHHGYY  180
NMVPTTSRSD FVFGLGENNN NNNNNNDIIV ELENGGYGRD VLENGVLEEF TNHHQEVANK  240
KRGGKRSNNN NIKQFSSTNT ERQRRVDLGG KFDALKELIP SSTKNDRASV VGDAIDYIKE  300
LLRTVNELKS LVEKKRYEKQ RVKKKLKIED EEEEEKEDDE NNSSSYSESL TRSSWIQRKS  360
KESEVDVRII DNEVTIKIVQ RKRVNDNNCI LVYASKVLDE LKLDLQHVGG GHIGDFCSFL  420
FNSKICEGSS VYASAIANKL IEVMDRSLLT I
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.07856
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016203091.10.0transcription factor bHLH10-like
RefseqXP_025630948.10.0transcription factor bHLH10
TrEMBLA0A445ALV50.0A0A445ALV5_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF14498811
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G06170.29e-52bHLH family protein