PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.01BXJ
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family B3
Protein Properties Length: 119aa    MW: 13803.9 Da    PI: 9.8038
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.01BXJgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3491.1e-1513901597
                 -EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEEEE CS
           B3 15 rlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvvkvf 97
                 +  +p kf+ ++ ++k+  +  +l  + g +W+v +   k+ +++++  GW++F ++n +k  Df+vF++dg+ + f  +v++f
  Araip.01BXJ 13 CAKIPTKFL-NY-LDKKLMRNAILIGPCGGKWQVSI--IKRENGVYMDHGWSKFLQENLVKHEDFLVFTYDGNnNHF--KVQIF 90
                 345777777.44.44557779***************..999999***************************976666..99887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM010192.3E-41293IPR003340B3 DNA binding domain
SuperFamilySSF1019368.63E-191395IPR015300DNA-binding pseudobarrel domain
PfamPF023627.5E-131391IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.103.4E-191395IPR015300DNA-binding pseudobarrel domain
PROSITE profilePS5086311.3921693IPR003340B3 DNA binding domain
CDDcd100178.81E-181691No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 119 aa     Download sequence    Send to blast
MHHHQQNKPN SFCAKIPTKF LNYLDKKLMR NAILIGPCGG KWQVSIIKRE NGVYMDHGWS  60
KFLQENLVKH EDFLVFTYDG NNNHFKVQIF CKNGCEAPKP KKSRPTTSCP QISPENERS
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.01BXJ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003539033.25e-25B3 domain-containing protein Os11g0197600
RefseqXP_004507367.19e-26B3 domain-containing protein Os11g0197600-like
RefseqXP_028186698.15e-25B3 domain-containing protein Os11g0197600-like
TrEMBLA0A445A8W91e-81A0A445A8W9_ARAHY; Uncharacterized protein
STRINGXP_004507367.14e-25(Cicer arietinum)
STRINGGLYMA11G13231.12e-24(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF14239914
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06220.12e-16B3 family protein