PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Neem_5381_f_1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Meliaceae; Azadirachta
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Family | bZIP | ||||||||
Protein Properties | Length: 249aa MW: 28529.3 Da PI: 8.7833 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 43.9 | 5.3e-14 | 154 | 197 | 5 | 48 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 +r++r++kNRe+A rsR+RK+a++ +Le +v L + N++L+ke Neem_5381_f_1 154 RRQKRMIKNRESAARSRARKQAYTNHLESRVLCLRQTNSSLRKE 197 69****************************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 4.4E-10 | 150 | 207 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.289 | 152 | 197 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 2.0E-11 | 154 | 203 | No hit | No description |
Pfam | PF00170 | 2.4E-12 | 154 | 197 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 6.5E-14 | 154 | 199 | No hit | No description |
CDD | cd14707 | 1.17E-17 | 154 | 200 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 157 | 172 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 249 aa Download sequence Send to blast |
MVPANRAQGS LFQPLARQGS VYNPSSFDEV QSQMGKPMNL NEFVKNVVSG SPEDVWKEIV 60 HHEHVNEVDN QSVQQQLTLG ETTLEDFLLR AGVINIGNVY NENPVAEIGY SENQLGFTMP 120 VPAVPATPSS DSKVVNNERK RRYSDEIMEK TIERRQKRMI KNRESAARSR ARKQAYTNHL 180 ESRVLCLRQT NSSLRKEKGC CLEVNLTVFR KHETEMLMLL FQQEMEMVWS SYGNGVQMSK 240 YQLRRTSSI |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015887632.2 | 2e-58 | ABSCISIC ACID-INSENSITIVE 5-like protein 2 | ||||
TrEMBL | A0A2N9FXK0 | 2e-59 | A0A2N9FXK0_FAGSY; Uncharacterized protein | ||||
STRING | XP_006473016.1 | 4e-63 | (Citrus sinensis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM17216 | 9 | 11 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G41070.3 | 2e-31 | bZIP family protein |