PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Neem_37635_f_3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Meliaceae; Azadirachta
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Family | NAC | ||||||||
Protein Properties | Length: 184aa MW: 21543.4 Da PI: 5.8489 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 51.5 | 3.3e-16 | 15 | 127 | 10 | 128 |
NAM 10 tdeelvveyLkkkvegkkleleevikev..diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvgl 102 +d+el + L++k++++++e+e i+e+ di ++ P++L + +++ ++w+fF+++ ++ + ++g+Wk+t k +e + ++ lvg+ Neem_37635_f_3 15 SDHELW-CILERKIRNQHIEEEISITEIqdDIKSLSPQELYLHPTHGFRKWHFFAQKVDQS-------HSPAQGFWKQTSKRREFII-SEYLVGI 100 799998.77************777*999889*********866667789*****9987643.......34568************99.899**** PP NAM 103 kktLvfy.kgrapkgektdWvmheyrl 128 k t++++ g+ + ++tdW ++e++l Neem_37635_f_3 101 KSTFTYFmIGEGRGISETDWRIDEFSL 127 ******95456666679********97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 15.527 | 6 | 147 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 6.15E-13 | 10 | 128 | IPR003441 | NAC domain |
Pfam | PF02365 | 2.1E-9 | 10 | 127 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 184 aa Download sequence Send to blast |
MAHSEFEESF RRNLSDHELW CILERKIRNQ HIEEEISITE IQDDIKSLSP QELYLHPTHG 60 FRKWHFFAQK VDQSHSPAQG FWKQTSKRRE FIISEYLVGI KSTFTYFMIG EGRGISETDW 120 RIDEFSLRCI DLRKDPEGVT LWYIAPEIIL AMHDTMARKT ADAEEVRGYV EAVVNGLGAN 180 VPKV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G56010.2 | 1e-11 | NAC domain containing protein 1 |