PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Neem_29202_f_1

Organism

Azadirachta indica

Taxonomic ID

124943

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Meliaceae; Azadirachta

Family

BES1

Protein Properties

Length: 103aa MW: 11856.6 Da PI: 10.1927

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Neem_29202_f_1	genome	NGD	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	164.7	5.5e-51	3	78	1	76
DUF822 1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpl 76 g+sgr ptwkErEnnkrRERrRRaiaakiyaGLRaqGn+klpk++DnneVlkALc+eAGwvve+DGttyrk ++ + Neem_29202_f_1 3 GSSGRLPTWKERENNKRRERRRRAIAAKIYAGLRAQGNFKLPKHCDNNEVLKALCAEAGWVVEEDGTTYRKICRFH 78 689********************************************************************99865 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF05687	1.2E-46	4	76	IPR008540	BES1/BZR1 plant transcription factor, N-terminal

Sequence ? help Back to Top
Protein Sequence Length: 103 aa Download sequence Send to blast
MTGSSGRLPT WKERENNKRR ERRRRAIAAK IYAGLRAQGN FKLPKHCDNN EVLKALCAEA 60 GWVVEEDGTT YRKICRFHCN IGNGFHDSRS FDFLVIVLLG YNL

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
5zd4_A	3e-27	7	76	372	441	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B	3e-27	7	76	372	441	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C	3e-27	7	76	372	441	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D	3e-27	7	76	372	441	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
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Functional Description ? help Back to Top
Source	Description
UniProt	May function in brassinosteroid signaling. {ECO:0000250}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009352718.1	9e-38	PREDICTED: BES1/BZR1 homolog protein 4-like
Swissprot	Q6EUF1	1e-28	BZR4_ORYSJ; Protein BZR1 homolog 4
TrEMBL	A0A444FK93	8e-35	A0A444FK93_ENSVE; Uncharacterized protein
STRING	XP_009352718.1	4e-37	(Pyrus x bretschneideri)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Malvids	OGEM15511	11	17

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G50750.1	2e-25	BES1/BZR1 homolog 1