PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy023030
Organism
Arachis hypogaea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family C2H2
Protein Properties Length: 596aa    MW: 65380.6 Da    PI: 9.5546
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S58474687PU_refUnigeneView CDS
PUT-171a-Arachis_hypogaea-1930892PU_unrefplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H216.13.1e-056284123
               EEETTTTEEESSHHHHHHHHHHT CS
    zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
               + C+ C+k F r  nL+ H r H
  Ahy023030 62 FICEVCNKGFQREQNLQLHRRGH 84
               89*******************88 PP
2zf-C2H211.80.00072138160123
                EEETTTTEEESSHHHHHHHHHHT CS
    zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                +kC +C+k +  +s+ k H +t+
  Ahy023030 138 WKCDKCSKKYAVQSDWKAHSKTC 160
                58*****************9998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.160.606.7E-66184IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
SuperFamilySSF576671.88E-76184No hitNo description
SMARTSM003550.00526284IPR015880Zinc finger, C2H2-like
PfamPF121712.9E-56284IPR022755Zinc finger, double-stranded RNA binding
PROSITE profilePS5015710.996284IPR007087Zinc finger, C2H2
PROSITE patternPS0002806484IPR007087Zinc finger, C2H2
SMARTSM00355130103133IPR015880Zinc finger, C2H2-like
Gene3DG3DSA:3.30.160.606.7E-5126159IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
SuperFamilySSF576671.88E-7133158No hitNo description
SMARTSM00355150138158IPR015880Zinc finger, C2H2-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003676Molecular Functionnucleic acid binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 596 aa     Download sequence    Send to blast
XLRESEKKVK ARLHINPPXA ASSASTPPAV PQKKRRNQPG TPNPDAEVIA LSPKTLMATN  60
RFICEVCNKG FQREQNLQLH RRGHNLPWKL KQKTNKEPKR KVYLCPEPTC VHHDPSRALG  120
DLTGIKKHYS RKHGEKKWKC DKCSKKYAVQ SDWKAHSKTC GTREYRCDCG TLFSRRDSFI  180
THRAFCDALA QESARHPNGT MNPLGGTHLY ATNTNHMTLG LSQLGTQISQ FQNHQSGATH  240
GSGGGGILRL GSAGAAKFEH LIPPLSHQSS SFGHSPQSSL TNPSPFFIND PNQAFEDNNQ  300
THQQGSLFSS KQLHGLMQLP DLQGNTTNTN SNNSSNLFNL SFFPNNNNSS GTIIPDQFNS  360
NQQGTTTSTL YGDQVGSGLS SLFGNSSSLQ HENVSPHMSA TALLQKAAQM GPTTTTNNNN  420
GSSILRGMCS SSSNKSEREL VVSDHVAFGS DQRRSSMEND HHHQQHLHGL MNSIASNVGN  480
TTTSSIFDNV HQGNDDNNNN LSHHHHHHQF HQSLEDSSNT NKLPQNHLGV SFGGSDKLTL  540
DFLGVGGMVR NINTGATTHA FSQTHREQQQ QGMMNTLSSL DSDLKSAQSA TPSHRF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5b3h_C7e-34134195364Zinc finger protein JACKDAW
5b3h_F7e-34134195364Zinc finger protein JACKDAW
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025621405.10.0protein indeterminate-domain 4, chloroplastic
RefseqXP_025621406.10.0protein indeterminate-domain 4, chloroplastic
TrEMBLA0A445BCN00.0A0A445BCN0_ARAHY; Uncharacterized protein
STRINGGLYMA20G32480.10.0(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G02080.11e-104indeterminate(ID)-domain 4