PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy022934
Organism
Arachis hypogaea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family GATA
Protein Properties Length: 290aa    MW: 31394.6 Da    PI: 6.4986
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S59520394PU_refUnigeneView CDS
PUT-171a-Arachis_hypogaea-8730896PU_unrefplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA50.72.4e-16202239136
       GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkglk 36 
                C++Cg ++  Tp++Rrgp+g+++LCnaCGl++  +g++
  Ahy022934 202 CTHCGISSkaTPMMRRGPSGPRSLCNACGLFWSNRGTM 239
                *****9999*************************9986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5132015.23466101IPR010399Tify domain
SMARTSM009792.6E-1266101IPR010399Tify domain
PfamPF062003.2E-1370100IPR010399Tify domain
PfamPF062034.3E-16134176IPR010402CCT domain
PROSITE profilePS5101712.65134176IPR010402CCT domain
PROSITE profilePS5011410.264196247IPR000679Zinc finger, GATA-type
SMARTSM004011.5E-14196249IPR000679Zinc finger, GATA-type
SuperFamilySSF577162.52E-12199256No hitNo description
Gene3DG3DSA:3.30.50.101.0E-15200243IPR013088Zinc finger, NHR/GATA-type
CDDcd002021.19E-14201247No hitNo description
PROSITE patternPS003440202229IPR000679Zinc finger, GATA-type
PfamPF003201.5E-13202239IPR000679Zinc finger, GATA-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0005515Molecular Functionprotein binding
GO:0008270Molecular Functionzinc ion binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 290 aa     Download sequence    Send to blast
MYGSMNVPNQ ISAAEDNGAA ASDSVDNHHH NHYNSHGLED GAGGVVEDAD TVYVSGGGGP  60
DMSIIPCEDS SQLTLSFRGQ VYVFDSVTPE KVQAVLLLLG GCEMPSSGSQ CAELSPQNQR  120
GAVEFPGRCS QPHRAASLNR FRQKRKERCF DKKVRYSVRQ EVALRMQRNK GQFTSSKKQD  180
GANSCGSDQE SMQDAVQSET SCTHCGISSK ATPMMRRGPS GPRSLCNACG LFWSNRGTMR  240
DLSKRNQEHT LALPEPVNEG NNTDCRTAVP ENINVAAFSE NDNASLATDR
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. {ECO:0000250, ECO:0000269|PubMed:14966217}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016163727.10.0GATA transcription factor 25
RefseqXP_025613243.10.0GATA transcription factor 25
RefseqXP_025666691.10.0GATA transcription factor 25
SwissprotQ9LRH68e-89GAT25_ARATH; GATA transcription factor 25
TrEMBLA0A445BTU30.0A0A445BTU3_ARAHY; Uncharacterized protein
STRINGXP_007141281.11e-144(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24470.23e-91GATA-type zinc finger protein with TIFY domain
Publications ? help Back to Top
  1. Brand LH, et al.
    Screening for protein-DNA interactions by automatable DNA-protein interaction ELISA.
    PLoS ONE, 2013. 8(10): p. e75177
    [PMID:24146751]