PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy022918
Organism
Arachis hypogaea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family GATA
Protein Properties Length: 134aa    MW: 14080.8 Da    PI: 10.7123
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S59558562PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA58.31e-182760134
       GATA  1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34
               C+ Cgt+kTplWR gp g+k+LCnaCG++ rkk+
  Ahy022918 27 CADCGTSKTPLWRGGPAGPKSLCNACGIRSRKKK 60
               ********************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF577169.03E-132061No hitNo description
SMARTSM004011.8E-112173IPR000679Zinc finger, GATA-type
PROSITE profilePS5011412.1492157IPR000679Zinc finger, GATA-type
Gene3DG3DSA:3.30.50.107.9E-162561IPR013088Zinc finger, NHR/GATA-type
CDDcd002021.77E-122676No hitNo description
PfamPF003201.1E-162761IPR000679Zinc finger, GATA-type
PROSITE patternPS0034402752IPR000679Zinc finger, GATA-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0008270Molecular Functionzinc ion binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 134 aa     Download sequence    Send to blast
MVDSTGKGSD SSGGGGKSPT TELKKTCADC GTSKTPLWRG GPAGPKSLCN ACGIRSRKKK  60
RAILGITRGT ADDVKGATXA ANNSLNFKQR FMALARQVMT KKSNNLAHSH RNKLGEEEQA  120
AVLLMSLSYG SVYA
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. {ECO:0000250}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015938296.15e-77GATA transcription factor 15
RefseqXP_016177795.15e-77GATA transcription factor 15
RefseqXP_025610703.15e-77GATA transcription factor 15
RefseqXP_025630166.15e-77GATA transcription factor 15
SwissprotQ8LG105e-38GAT15_ARATH; GATA transcription factor 15
TrEMBLA0A445ELW41e-75A0A445ELW4_ARAHY; Uncharacterized protein
STRINGXP_009347769.17e-48(Pyrus x bretschneideri)
STRINGXP_009369967.17e-48(Pyrus x bretschneideri)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06740.16e-40GATA transcription factor 15
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Behringer C,Bastakis E,Ranftl QL,Mayer KF,Schwechheimer C
    Functional diversification within the family of B-GATA transcription factors through the leucine-leucine-methionine domain.
    Plant Physiol., 2014. 166(1): p. 293-305
    [PMID:25077795]
  3. Ranftl QL,Bastakis E,Klermund C,Schwechheimer C
    LLM-Domain Containing B-GATA Factors Control Different Aspects of Cytokinin-Regulated Development in Arabidopsis thaliana.
    Plant Physiol., 2016. 170(4): p. 2295-311
    [PMID:26829982]