PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ahy022820

Organism

Arachis hypogaea

Taxonomic ID

3818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

MYB

Protein Properties

Length: 1061aa MW: 116788 Da PI: 7.1

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
gnl\|UG\|Ahy#S59551041	PU_ref	Unigene	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	27.2	8.8e-09	799	840	3	46
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +WT eE e++++ ++ +G++ +++Ia+ + ++t +c+++++k Ahy022820 799 PWTSEEREIFLEKFAVFGKD-FRKIASFLH-HKTTADCVEFYYK 840 8***************99.*****.*********98 PP
2	Myb_DNA-binding	29	2.5e-09	994	1035	3	46
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 WT +E +++av +G + + + ar++g +R+++qck ++ k Ahy022820 994 DWTDDEKAAFIQAVSSFGRD-FVKLARCIG-TRSPEQCKVFFSK 1035 5***************87.*****.******88765 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF46689	2.92E-14	783	843	IPR009057	Homeodomain-like
PROSITE profile	PS51293	15.926	795	846	IPR017884	SANT domain
SMART	SM00717	1.3E-8	796	844	IPR001005	SANT/Myb domain
Pfam	PF00249	2.2E-6	798	840	IPR001005	SANT/Myb domain
Gene3D	G3DSA:1.10.10.60	9.2E-6	798	843	IPR009057	Homeodomain-like
PROSITE profile	PS51293	11.343	990	1041	IPR017884	SANT domain
SMART	SM00717	8.3E-9	991	1039	IPR001005	SANT/Myb domain
SuperFamily	SSF46689	3.2E-9	992	1041	IPR009057	Homeodomain-like
Pfam	PF00249	3.2E-7	994	1034	IPR001005	SANT/Myb domain
Gene3D	G3DSA:1.10.10.60	2.1E-5	994	1035	IPR009057	Homeodomain-like
CDD	cd00167	1.17E-7	995	1033	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 1061 aa Download sequence Send to blast
MPPEPLPWDR KDFFKERKHE RSESLGSVAR WRDSSHHRDF HRWGSAEFRR PPGHGKQGGW 60 HVFSEDSGHG YGISRSSSEK MLDEDCRPSV SRGDGKYGRG SRENRGPFGQ RDWRGQSWET 120 TNGSMNLPRR PPDVNNDHRS VDDNLTYSAH PHSDFVNTWD PHHLKDQHDK IGGANGFGTG 180 ARSDRENFLA SIDWKPLKWT RSGSLSSRGS GFSHSSSSRS AGGADSHEAK AELHPKNATV 240 NESHSGEAAV CVTSSAPCED TTSRKKPRLN WGEGLAKYEK KKVEVPDGSA NKDGPVLSNG 300 SIEPCAFPGS SLVDKSPKVT GFSDCACASP ATPSSVACSS SPGVDDKLFG KPANVDNDVS 360 NLTCSPVPGS QDHFQRFSFN LEKLDIESLN SLNSSIIELI QSDDTSYVNS GPMRSTAMNK 420 LLIWKADISK VLETTESEID SLENELKSLR SASGDRGSYP AVLGSQMVGN NENPFEVPVG 480 VSDEVTRPEP LKILSSDDPD AEKLPLSTNL NSIHENGKEE DIDSPGSATS KLSEPPPLVK 540 AVSSSDTRRY DTFLEDANAG QSNGMKCLIP CTTRKYPSNS ACSDVNAASE VPDSIITASG 600 ASLRSSTEDS LYKKIISSNK ELAKSACGVF AKLLPQGYTK IDKVGASSDL CSQTSIMEKF 660 AEKKQFARFK ERVITLKFKA LHHLWKEDMR LLSIKKCRPK YHKKHELSVR STFNGNQKNR 720 FSIRSRFPLP AGNHLSLVPT AEVINFTRKL LSEPQVKIHR DALKMPALVL DEKIPKFISS 780 NGLVEDPLAI EKEKALINPW TSEEREIFLE KFAVFGKDFR KIASFLHHKT TADCVEFYYK 840 NHKSDCFEKL KKQQKLGKSF LAKTDLVASG KKWNHEANTA SLDILSAASV MADGFACNKK 900 MRPGNFLMGG YVNVKASRVD DSIRERSSSF DILGDEREAF ADVMASSEAM SFCGTSSVEP 960 VEGSRDSRLM PDTAENVDDE TCSDESCGEM DPTDWTDDEK AAFIQAVSSF GRDFVKLARC 1020 IGTRSPEQCK VFFSKARKCL GLDLMRPMPE NVGSPANDGA X

Sequence ? help Back to Top

Protein Sequence Length: 1061 aa Download sequence Send to blast

MPPEPLPWDR KDFFKERKHE RSESLGSVAR WRDSSHHRDF HRWGSAEFRR PPGHGKQGGW  60
HVFSEDSGHG YGISRSSSEK MLDEDCRPSV SRGDGKYGRG SRENRGPFGQ RDWRGQSWET  120
TNGSMNLPRR PPDVNNDHRS VDDNLTYSAH PHSDFVNTWD PHHLKDQHDK IGGANGFGTG  180
ARSDRENFLA SIDWKPLKWT RSGSLSSRGS GFSHSSSSRS AGGADSHEAK AELHPKNATV  240
NESHSGEAAV CVTSSAPCED TTSRKKPRLN WGEGLAKYEK KKVEVPDGSA NKDGPVLSNG  300
SIEPCAFPGS SLVDKSPKVT GFSDCACASP ATPSSVACSS SPGVDDKLFG KPANVDNDVS  360
NLTCSPVPGS QDHFQRFSFN LEKLDIESLN SLNSSIIELI QSDDTSYVNS GPMRSTAMNK  420
LLIWKADISK VLETTESEID SLENELKSLR SASGDRGSYP AVLGSQMVGN NENPFEVPVG  480
VSDEVTRPEP LKILSSDDPD AEKLPLSTNL NSIHENGKEE DIDSPGSATS KLSEPPPLVK  540
AVSSSDTRRY DTFLEDANAG QSNGMKCLIP CTTRKYPSNS ACSDVNAASE VPDSIITASG  600
ASLRSSTEDS LYKKIISSNK ELAKSACGVF AKLLPQGYTK IDKVGASSDL CSQTSIMEKF  660
AEKKQFARFK ERVITLKFKA LHHLWKEDMR LLSIKKCRPK YHKKHELSVR STFNGNQKNR  720
FSIRSRFPLP AGNHLSLVPT AEVINFTRKL LSEPQVKIHR DALKMPALVL DEKIPKFISS  780
NGLVEDPLAI EKEKALINPW TSEEREIFLE KFAVFGKDFR KIASFLHHKT TADCVEFYYK  840
NHKSDCFEKL KKQQKLGKSF LAKTDLVASG KKWNHEANTA SLDILSAASV MADGFACNKK  900
MRPGNFLMGG YVNVKASRVD DSIRERSSSF DILGDEREAF ADVMASSEAM SFCGTSSVEP  960
VEGSRDSRLM PDTAENVDDE TCSDESCGEM DPTDWTDDEK AAFIQAVSSF GRDFVKLARC  1020
IGTRSPEQCK VFFSKARKCL GLDLMRPMPE NVGSPANDGA X

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
4a69_C	1e-15	771	848	17	94	NUCLEAR RECEPTOR COREPRESSOR 2
4a69_D	1e-15	771	848	17	94	NUCLEAR RECEPTOR COREPRESSOR 2
Search in ModeBase

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020966324.1	0.0	uncharacterized protein LOC107617278 isoform X2
Refseq	XP_025675909.1	0.0	uncharacterized protein LOC112776118 isoform X2
TrEMBL	A0A444XTP9	0.0	A0A444XTP9_ARAHY; Uncharacterized protein
STRING	GLYMA20G31871.1	0.0	(Glycine max)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52250.1	1e-170	MYB family protein