PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ahy022503 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | AP2 | ||||||||
Protein Properties | Length: 321aa MW: 35268.2 Da PI: 8.4518 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 44.7 | 3.3e-14 | 71 | 121 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ +k grW+A+ + +k+++lg f+t+ eAa+a+++a+ k +g Ahy022503 71 SKYRGVTLHK-CGRWEARMGQF--L-GKKYVYLGLFDTEIEAARAYDKAAIKCNG 121 89********.7******5553..2.26**********99**********99776 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51032 | 11.983 | 1 | 36 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 7.85E-9 | 1 | 37 | IPR016177 | DNA-binding domain |
SMART | SM00380 | 5.8E-9 | 1 | 42 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 3.1E-11 | 2 | 36 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 7.1E-10 | 71 | 121 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 2.94E-17 | 71 | 131 | IPR016177 | DNA-binding domain |
CDD | cd00018 | 4.63E-26 | 71 | 131 | No hit | No description |
Gene3D | G3DSA:3.30.730.10 | 1.2E-16 | 72 | 129 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 4.2E-31 | 72 | 135 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 15.461 | 72 | 129 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 2.2E-6 | 73 | 84 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 2.2E-6 | 111 | 131 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 321 aa Download sequence Send to blast |
GKQVYLGGFD TAHAAARAYD RAAIKFRGVE ADINFNIEDY EEDLKQMTNL TKEEFVHVLR 60 RQSTGFPRGS SKYRGVTLHK CGRWEARMGQ FLGKKYVYLG LFDTEIEAAR AYDKAAIKCN 120 GKEAVTNFDP SIYENELNSE SSGGNGAADH NLDLSLGNPS SKHSSTTDWH NEGANNNKHK 180 LVNILPKPCS SRSNIESEAM PPMRLYSSNA ISALKEMHRY GPYYRSHAAG ETPHQMLHAF 240 PPNFHFPSSS KGGRIGSELS LSSSMSDQEQ HVQWQAGAGG GPPHLLATAA AASSGFPPQI 300 LTPSSQGWIH KNGFHTLMRP S |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcriptional activator that promotes early floral meristem identity (PubMed:7919989). Is required subsequently for the transition of an inflorescence meristem into a floral meristem (PubMed:1675158). Plays a central role in the specification of floral identity, particularly for the normal development of sepals and petals in the wild-type flower, by spatially controlling the expression domains of multiple floral organ identity genes (PubMed:1675158, PubMed:23034631). Acts as A class cadastral protein by repressing the C class floral homeotic gene AGAMOUS in association with other repressors like LEUNIG and SEUSS (PubMed:1675158). Directly represses AGAMOUS by recruiting the transcriptional corepressor TOPLESS and the histone deacetylase HDA19 (PubMed:23034631). It is also required during seed development (PubMed:1675158). {ECO:0000269|PubMed:1675158, ECO:0000269|PubMed:23034631, ECO:0000269|PubMed:7919989}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Negatively regulated by the C class floral homeotic protein AGAMOUS in stamens and carpels. MicroRNA 172 (miRNA172) negatively regulates APETALA2 at the translational level and may modulate its expression pattern. Seems not to be influenced by jasmonate and Alternaria brassicicola. {ECO:0000269|PubMed:12805630, ECO:0000269|PubMed:12893888, ECO:0000269|PubMed:14555699}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015963905.1 | 0.0 | floral homeotic protein APETALA 2 | ||||
Refseq | XP_025698673.1 | 0.0 | floral homeotic protein APETALA 2 | ||||
Swissprot | P47927 | 3e-91 | AP2_ARATH; Floral homeotic protein APETALA 2 | ||||
TrEMBL | A0A444ZAB8 | 1e-172 | A0A444ZAB8_ARAHY; Uncharacterized protein | ||||
STRING | XP_007156779.1 | 1e-145 | (Phaseolus vulgaris) |