PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy022388
Organism
Arachis hypogaea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 278aa    MW: 31461.3 Da    PI: 8.3709
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S59537581PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR177.52.5e-2461151291
       FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 
                +Y +YAk+vGF vrk    +  ++g+  +r+f C+k g+ree+  +  +++r+++aetrtgC+akl + +++ +++w+v kl++eHnHel p
  Ahy022388  61 CYVSYAKSVGFGVRKGDAARG-KDGKYRRRRFFCNKAGHREEKYYNnPNRKREHKAETRTGCEAKLSIYLDEsSSVWKVRKLVEEHNHELIP 151
                7****************9998.7888***************99887568888999***************999****************975 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031011.9E-2261151IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    Send to blast
MDIEGEATYL ESDEGGQNMK ETQKNVSCTC ACRGSSRYCG VLTTEDIRNH SWMTSDAAYE  60
CYVSYAKSVG FGVRKGDAAR GKDGKYRRRR FFCNKAGHRE EKYYNNPNRK REHKAETRTG  120
CEAKLSIYLD ESSSVWKVRK LVEEHNHELI PQCLVHLIPN HRRLTDANKA QTDTMIMHGL  180
PTSQIMGYLV GQAGGYHRVG FSKKDLDNYI ERSRRARIIG GDSNATIGYL SGKADLDPMA  240
MARYSSTLED RLGNLFWADG MSRADYQLFG DVLAFDTT
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025619919.10.0protein FAR1-RELATED SEQUENCE 5 isoform X1
RefseqXP_025619920.10.0protein FAR1-RELATED SEQUENCE 5 isoform X1
RefseqXP_025619921.10.0protein FAR1-RELATED SEQUENCE 5 isoform X1
RefseqXP_025619922.10.0protein FAR1-RELATED SEQUENCE 5 isoform X1
RefseqXP_029145020.10.0protein FAR1-RELATED SEQUENCE 5 isoform X1
RefseqXP_029145021.10.0protein FAR1-RELATED SEQUENCE 5 isoform X1
TrEMBLA0A445A5M31e-123A0A445A5M3_ARAHY; Uncharacterized protein
TrEMBLA0A445DRG31e-122A0A445DRG3_ARAHY; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.12e-34FAR1-related sequence 5