PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ahy022158

Organism

Arachis hypogaea

Taxonomic ID

3818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

MYB

Protein Properties

Length: 196aa MW: 22125.9 Da PI: 10.5373

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
gnl\|UG\|Ahy#S59544424	PU_ref	Unigene	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	24.1	8.2e-08	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l + +l + + +++ g+ R++k+c++rw +yl Ahy022158 14 KGPWTPEEDQKLXVVTSLLYLFLFXALPSKAGLQRCGKSCRLRWTNYL 61 79***************9999*********************97 PP
2	Myb_DNA-binding	44.2	4.5e-14	67	114	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HH..HHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlk..qcksrwqkyl 48 rg+++ +E++ +++++++lG++ W++Ia +++ +Rt++ ++k++w+++l Ahy022158 67 RGKFSLQEEQTIIQLHALLGNR-WSAIATHLP-KRTDNekEIKNYWNTHL 114 89******************.*****.89986337****986 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50090	7.793	9	61	IPR017877	Myb-like domain
SuperFamily	SSF46689	4.69E-20	11	110	IPR009057	Homeodomain-like
SMART	SM00717	5.6E-6	13	63	IPR001005	SANT/Myb domain
Pfam	PF00249	1.2E-6	14	61	IPR001005	SANT/Myb domain
Gene3D	G3DSA:1.10.10.60	7.5E-17	15	68	IPR009057	Homeodomain-like
PROSITE profile	PS51294	22.541	62	118	IPR017930	Myb domain
SMART	SM00717	2.6E-12	66	116	IPR001005	SANT/Myb domain
Pfam	PF00249	2.0E-13	67	114	IPR001005	SANT/Myb domain
CDD	cd00167	1.05E-9	69	114	No hit	No description
Gene3D	G3DSA:1.10.10.60	7.8E-24	69	118	IPR009057	Homeodomain-like

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 196 aa Download sequence Send to blast
MGRSPCCDKV GLKKGPWTPE EDQKLXVVTS LLYLFLFXAL PSKAGLQRCG KSCRLRWTNY 60 LRPDIKRGKF SLQEEQTIIQ LHALLGNRWS AIATHLPKRT DNEKEIKNYW NTHLKKRLTK 120 MGIDPVTHKP KNDTLLSSDG QSKTAANLSH MAQWESARLE AEARLVRESK LRSHLTTSSS 180 SNNKPSSEVV SAALPP

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
1a5j_A	3e-22	12	118	5	108	B-MYB
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Functional Description ? help Back to Top
Source	Description
UniProt	Functions as a repressor of epidermal cell outgrowth and negatively regulate trichome branch formation (PubMed:18805951, PubMed:21070410). Acts as both a positive and negative regulator of cellular outgrowth. Promotes both trichome expansion and branch formation (PubMed:21070410). Coordinately with WIN1/SHN1, participates in the regulation of cuticle biosynthesis and wax accumulation in reproductive organs and trichomes. Functions in cuticle nanoridge formation in petals and stamens, and in morphogenesis of petal conical cells and trichomes (PubMed:23709630). May play a role in the regulation of cuticle formation in vegetative organs (PubMed:24169067). {ECO:0000269\|PubMed:18805951, ECO:0000269\|PubMed:21070410, ECO:0000269\|PubMed:23709630, ECO:0000269\|PubMed:24169067}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025683964.1	1e-117	transcription factor MYB106
Swissprot	Q9LE63	4e-99	MY106_ARATH; Transcription factor MYB106
TrEMBL	A0A444X882	1e-115	A0A444X882_ARAHY; Uncharacterized protein
STRING	XP_004489411.1	1e-109	(Cicer arietinum)