PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy021882
Organism
Arachis hypogaea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family GATA
Protein Properties Length: 311aa    MW: 34223 Da    PI: 6.4502
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S54185039PU_unrefUnigeneView CDS
gnl|UG|Ahy#S58472836PU_refUnigeneView CDS
PUT-171a-Arachis_hypogaea-17698PU_unrefplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA48.21.5e-15233269135
       GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 
                C++Cg ++  Tp++Rrgp+g++tLCnaCGl+++ kg+
  Ahy021882 233 CRHCGISEkcTPMMRRGPEGPRTLCNACGLMWANKGT 269
                **********************************997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5132014.22789124IPR010399Tify domain
SMARTSM009792.6E-1089124IPR010399Tify domain
PfamPF062002.4E-1295123IPR010399Tify domain
PROSITE profilePS5101713.245158200IPR010402CCT domain
PfamPF062033.6E-16158200IPR010402CCT domain
SMARTSM004011.9E-13227280IPR000679Zinc finger, GATA-type
PROSITE profilePS501148.84227285IPR000679Zinc finger, GATA-type
SuperFamilySSF577168.55E-13229291No hitNo description
Gene3DG3DSA:3.30.50.105.5E-15231274IPR013088Zinc finger, NHR/GATA-type
CDDcd002021.76E-13232274No hitNo description
PfamPF003201.9E-13233269IPR000679Zinc finger, GATA-type
PROSITE patternPS003440233260IPR000679Zinc finger, GATA-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0005515Molecular Functionprotein binding
GO:0008270Molecular Functionzinc ion binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    Send to blast
MVLAFCAMDG IHGGDSRIHM SEGQHPMHVS YVQEHEHHGL HHMSNGNGME DDQNNGDDTN  60
CGGSESVEGE IPSNHGNLPE NHTAMIDQGG DVGDQLTLSF QGQVYVFDSV SPEKVQAVLL  120
LLGGREVPPT MPAMPILPHQ SNQQGFTGTP QKFSVPQRLA SLLRFREKRK ERNFDKKIRY  180
TVRKEVALRM QRNKGQFTSS KPNHDESASG AANWGANESW SSDNNGSQQD IVCRHCGISE  240
KCTPMMRRGP EGPRTLCNAC GLMWANKGTL RDLSRAASMA GHNSQLNKNE NKDFEANQMV  300
QTVAADVEDS S
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. {ECO:0000250, ECO:0000269|PubMed:14966217}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016176295.10.0GATA transcription factor 28 isoform X1
RefseqXP_025676156.10.0GATA transcription factor 28 isoform X1
RefseqXP_025676157.10.0GATA transcription factor 28 isoform X1
SwissprotQ8H1G01e-135GAT28_ARATH; GATA transcription factor 28
TrEMBLA0A445BQR30.0A0A445BQR3_ARAHY; Uncharacterized protein
STRINGGLYMA08G23720.20.0(Glycine max)
STRINGXP_007142122.10.0(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G51600.21e-137ZIM-LIKE 2