PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ahy021814 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | NAC | ||||||||
Protein Properties | Length: 328aa MW: 36226.6 Da PI: 8.6178 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 174.8 | 2.5e-54 | 21 | 149 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kge 98 lppGfrFhPtdeelvv+yLkkk+++++l++ +i++vd+yk++Pw+Lp+k++ +++ewyfFs+rd+ky++g r+nra++sgyWkatg+dk++ls+ +++ Ahy021814 21 LPPGFRFHPTDEELVVHYLKKKASSSPLPV-AIIADVDLYKFDPWELPSKAAFGDQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPILSSdgNKQ 119 79****************************.88***************888899****************************************988888 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 +vg+kk Lvfy g+ pkg+kt+W+mheyrl Ahy021814 120 KVGVKKALVFYGGKPPKGVKTNWIMHEYRL 149 9***************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 2.62E-65 | 16 | 190 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 62.105 | 21 | 190 | IPR003441 | NAC domain |
Pfam | PF02365 | 2.2E-28 | 22 | 149 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 328 aa Download sequence Send to blast |
MVDNSTDSSS GAGEQHHHPQ LPPGFRFHPT DEELVVHYLK KKASSSPLPV AIIADVDLYK 60 FDPWELPSKA AFGDQEWYFF SPRDRKYPNG ARPNRAATSG YWKATGTDKP ILSSDGNKQK 120 VGVKKALVFY GGKPPKGVKT NWIMHEYRLT DNNNNASSSI SSKPPSIPLD PLKKTSLRLD 180 DWVLCRIYKK SNSSSSSLPI PRPAFLMDEE KDLISMENSM VPTMSMSKPR STSTTGCYGP 240 MALENDDNFF DGILAASTDH HTMQNGSPGS SSSSKRFHGD LNNGDNTSFV SLLNQLPHNT 300 PFHPNSILGS VGDAVLRQQF QLPGLNWN |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1ut4_A | 5e-73 | 21 | 195 | 17 | 170 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 5e-73 | 21 | 195 | 17 | 170 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 5e-73 | 21 | 195 | 17 | 170 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 5e-73 | 21 | 195 | 17 | 170 | NO APICAL MERISTEM PROTEIN |
3swm_A | 6e-73 | 21 | 195 | 20 | 173 | NAC domain-containing protein 19 |
3swm_B | 6e-73 | 21 | 195 | 20 | 173 | NAC domain-containing protein 19 |
3swm_C | 6e-73 | 21 | 195 | 20 | 173 | NAC domain-containing protein 19 |
3swm_D | 6e-73 | 21 | 195 | 20 | 173 | NAC domain-containing protein 19 |
3swp_A | 6e-73 | 21 | 195 | 20 | 173 | NAC domain-containing protein 19 |
3swp_B | 6e-73 | 21 | 195 | 20 | 173 | NAC domain-containing protein 19 |
3swp_C | 6e-73 | 21 | 195 | 20 | 173 | NAC domain-containing protein 19 |
3swp_D | 6e-73 | 21 | 195 | 20 | 173 | NAC domain-containing protein 19 |
4dul_A | 5e-73 | 21 | 195 | 17 | 170 | NAC domain-containing protein 19 |
4dul_B | 5e-73 | 21 | 195 | 17 | 170 | NAC domain-containing protein 19 |
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Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor of the NAC family. May be associated with anther development and pollen production (Probable). Required for normal seed development and morphology (PubMed:18849494). {ECO:0000269|PubMed:18849494, ECO:0000305|PubMed:21107887}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015956312.1 | 0.0 | NAC transcription factor 25-like | ||||
Refseq | XP_025690050.1 | 0.0 | NAC transcription factor 25 | ||||
Swissprot | Q8GY42 | 1e-113 | NAC25_ARATH; NAC transcription factor 25 | ||||
TrEMBL | A0A445DRC0 | 0.0 | A0A445DRC0_ARAHY; Uncharacterized protein | ||||
STRING | XP_007159283.1 | 1e-150 | (Phaseolus vulgaris) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G61110.1 | 1e-107 | NAC domain containing protein 25 |