PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy021784
Organism
Arachis hypogaea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family LBD
Protein Properties Length: 291aa    MW: 31473.7 Da    PI: 7.9196
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S59522357PU_refUnigeneView CDS
PUT-171a-Arachis_hypogaea-4804PU_unrefplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26096.33.3e-304105197
     DUF260   1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 
                +C++C+vlr++C++dC ++p++     +++q++++ +++k++G++ +++l++a p++ r+++++sl+yeA+ r+ +P+yG+vg+++++++ql+q+++e++
  Ahy021784   4 SCNGCRVLRKGCSEDCSIRPCLewiksAESQANATLFLAKFYGRAGLINLINAGPNHLRPAVFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAV 103
                6*********************9999777889****************************************************************9988 PP

     DUF260  96 ll 97 
                l 
  Ahy021784 104 LK 105
                75 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5089116.5493109IPR004883Lateral organ boundaries, LOB
PfamPF031951.6E-244103IPR004883Lateral organ boundaries, LOB
Sequence ? help Back to Top
Protein Sequence    Length: 291 aa     Download sequence    Send to blast
MRMSCNGCRV LRKGCSEDCS IRPCLEWIKS AESQANATLF LAKFYGRAGL INLINAGPNH  60
LRPAVFRSLL YEACGRIVNP IYGSVGLLWS GSWQLCQAAV EAVLKGLPIT PINSELAESG  120
RGPPFKAHDI RHVSKPDNNT VTAASHETKR VKTRSRIKKP KVAEVAKRAS SHESSLSHER  180
VEAVATAAEG ESKEIESDVS VETTTTTVRF HDEPDSDAKG SGGSAEVCGN EVGLELTLGF  240
ETVSREHDVV VPMKKRRIDL KDFCGGVSSD NGSCKMELGL QFQAFNGSVL T
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016182188.10.0LOB domain-containing protein 40
RefseqXP_025680555.10.0LOB domain-containing protein 40
SwissprotQ9M8861e-100LBD41_ARATH; LOB domain-containing protein 41
TrEMBLA0A444X9G10.0A0A444X9G1_ARAHY; Uncharacterized protein
STRINGGLYMA19G06280.11e-126(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G02550.11e-103LOB domain-containing protein 41