PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy021284
Organism
Arachis hypogaea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family ARR-B
Protein Properties Length: 299aa    MW: 33368.9 Da    PI: 8.0012
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S59555323PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like91.47.7e-29200253155
    G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                kpr++W+ eLH++Fv av+qL G++kA+Pk+il+lm+v+ Lt+e+v+SHLQkYRl
  Ahy021284 200 KPRVVWSVELHRKFVAAVNQL-GIDKAVPKKILDLMNVDKLTRENVASHLQKYRL 253
                79*******************.********************************8 PP
2Response_reg85.12.1e-28181241109
                   EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTESEE CS
  Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekdpDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGakdf 97 
                   vl vdD+p+ +++l+++l++ +y +v++++++ +al+ll+e+++Dl++ D+ mp+mdG++ll+     e++lp+i+++a+g+ +++ + ++ Ga d+
     Ahy021284  18 VLAVDDDPTCLMVLETLLRRCQY-HVTTTSQAIKALKLLRENKFDLVISDVHMPDMDGFKLLELVGL-EMDLPVIMLSANGDTKLVMKGISHGACDY 112
                   799********************.**************************************87754.558************************** PP

                   EESS--HHHHHH CS
  Response_reg  98 lsKpfdpeelvk 109
                   l Kp+ +eel +
     Ahy021284 113 LLKPVRIEELKN 124
                   *********987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PIRSFPIRSF0363923.9E-1611299IPR017053Response regulator B-type, plant
SuperFamilySSF521726.83E-3914136IPR011006CheY-like superfamily
Gene3DG3DSA:3.40.50.23006.1E-4514148No hitNo description
SMARTSM004484.8E-3216126IPR001789Signal transduction response regulator, receiver domain
PROSITE profilePS5011043.6417130IPR001789Signal transduction response regulator, receiver domain
PfamPF000728.9E-2618124IPR001789Signal transduction response regulator, receiver domain
CDDcd001561.04E-2919130No hitNo description
Gene3DG3DSA:1.10.10.606.9E-31197258IPR009057Homeodomain-like
PROSITE profilePS5129412.771197256IPR017930Myb domain
SuperFamilySSF466892.15E-20198257IPR009057Homeodomain-like
TIGRFAMsTIGR015571.3E-25200253IPR006447Myb domain, plants
PfamPF002493.8E-7202252IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 299 aa     Download sequence    Send to blast
MENGVDDSSD QFPKGMRVLA VDDDPTCLMV LETLLRRCQY HVTTTSQAIK ALKLLRENKF  60
DLVISDVHMP DMDGFKLLEL VGLEMDLPVI MLSANGDTKL VMKGISHGAC DYLLKPVRIE  120
ELKNIWQHVI RRKKFDSKEK NKTRNSDKPS SEGGNVLGSA GTGNSEQNGK LNKKRKDQDD  180
EEDEEQDNGH DNEDPSAQKK PRVVWSVELH RKFVAAVNQL GIDKAVPKKI LDLMNVDKLT  240
RENVASHLQK YRLYLKRISC VANQQANMVA ALGRADPSYL RMGSLSGVGH LQALSGSGX
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1irz_A3e-28196259164ARR10-B
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specific DNA sequence. Functions as a response regulator involved in His-to-Asp phosphorelay signal transduction system. Phosphorylation of the Asp residue in the receiver domain activates the ability of the protein to promote the transcription of target genes. May directly activate some type-A response regulators in response to cytokinins. {ECO:0000250|UniProtKB:Q940D0}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025623592.10.0two-component response regulator ARR12 isoform X2
SwissprotB8AEH11e-137ORR23_ORYSI; Two-component response regulator ORR23
TrEMBLA0A445B4W50.0A0A445B4W5_ARAHY; Two-component response regulator
STRINGGLYMA04G06650.11e-176(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G25180.11e-121response regulator 12