PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ahy021094 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | C2H2 | ||||||||
Protein Properties | Length: 323aa MW: 35457.8 Da PI: 8.1017 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 13.5 | 0.00022 | 33 | 55 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k + +s+ k H +t+ Ahy021094 33 WKCEKCSKKYAVQSDWKAHSKTC 55 58*****************9998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:3.30.160.60 | 2.1E-4 | 21 | 54 | IPR013087 | Zinc finger C2H2-type/integrase DNA-binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003676 | Molecular Function | nucleic acid binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 323 aa Download sequence Send to blast |
PEPSCVHHNP SRALGDLTGI KKHFCRKHGE KKWKCEKCSK KYAVQSDWKA HSKTCGTREY 60 RCDCGTLFSR RDSFITHRAF CDALAQETAR TTTTTSTTTI PQLHHQFNNP QIFPLKKEPL 120 QLHHQSFNLV RTELPPWLGS SSSSSNTPTP SQNNHQGQDF LNLHENNENP NPNPNPNPRL 180 VGVGGPTIEG YPSAHMSATA LLQKAAQMGA TMSSSIGPHH QSHVSVNPSA TLNHFPLNLS 240 SRDHHHHNHN HITTTTTTTT TTTAAPSSSS SLLHDVMMMN SFSSGFEAAQ FDDPFGGILV 300 SNNNITKKDG DDNGNGNDGN NNX |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5b3h_C | 2e-37 | 29 | 93 | 3 | 67 | Zinc finger protein JACKDAW |
5b3h_F | 2e-37 | 29 | 93 | 3 | 67 | Zinc finger protein JACKDAW |
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Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor. {ECO:0000305}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016176182.1 | 1e-180 | protein indeterminate-domain 7 | ||||
Refseq | XP_025676394.1 | 1e-180 | protein indeterminate-domain 7 | ||||
Swissprot | Q8H1F5 | 8e-60 | IDD7_ARATH; Protein indeterminate-domain 7 | ||||
TrEMBL | A0A444XDN4 | 1e-178 | A0A444XDN4_ARAHY; Uncharacterized protein | ||||
STRING | GLYMA08G20520.2 | 8e-94 | (Glycine max) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G55110.1 | 9e-47 | indeterminate(ID)-domain 7 |
Publications ? help Back to Top | |||
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