PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ahy020963 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | GATA | ||||||||
Protein Properties | Length: 195aa MW: 20626.2 Da PI: 10.8862 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 58.9 | 6.5e-19 | 110 | 144 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 Cs+Cg+ kTp+WR gp g ktLCnaCG++y++ +l Ahy020963 110 CSHCGVQKTPQWRTGPLGAKTLCNACGVRYKSGRL 144 *******************************9986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00401 | 1.8E-16 | 104 | 158 | IPR000679 | Zinc finger, GATA-type |
SuperFamily | SSF57716 | 4.75E-15 | 104 | 166 | No hit | No description |
PROSITE profile | PS50114 | 11.978 | 104 | 140 | IPR000679 | Zinc finger, GATA-type |
Gene3D | G3DSA:3.30.50.10 | 4.8E-15 | 108 | 142 | IPR013088 | Zinc finger, NHR/GATA-type |
CDD | cd00202 | 2.28E-13 | 109 | 157 | No hit | No description |
PROSITE pattern | PS00344 | 0 | 110 | 135 | IPR000679 | Zinc finger, GATA-type |
Pfam | PF00320 | 8.3E-17 | 110 | 144 | IPR000679 | Zinc finger, GATA-type |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0008270 | Molecular Function | zinc ion binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 195 aa Download sequence Send to blast |
XPAAVPTSTP PAPPQPCFNT PVPAKARSKR TRTGVRVWPL ASPSFATTDS SSTTATATSS 60 TSSSPSSPLL IYATNLSQTM DQVSSDAPPK KPKKKASPEG GFPAQAPRRC SHCGVQKTPQ 120 WRTGPLGAKT LCNACGVRYK SGRLLPEYRP ACSPTFSSEL HSNHHRKVLE MRRKKETIGG 180 GVDTSGLAPP VVPSF |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. May be involved in the regulation of some light-responsive genes (By similarity). {ECO:0000250}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015964212.1 | 1e-137 | GATA transcription factor 5 | ||||
Refseq | XP_025698954.1 | 1e-137 | GATA transcription factor 5 | ||||
Swissprot | Q9FH57 | 2e-54 | GATA5_ARATH; GATA transcription factor 5 | ||||
TrEMBL | A0A444WRC0 | 1e-136 | A0A444WRC0_ARAHY; GATA transcription factor | ||||
STRING | XP_004512096.1 | 1e-72 | (Cicer arietinum) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G51080.1 | 2e-47 | GATA transcription factor 6 |