PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ahy020949

Organism

Arachis hypogaea

Taxonomic ID

3818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

NAC

Protein Properties

Length: 321aa MW: 36307.7 Da PI: 7.7433

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
gnl\|UG\|Ahy#S58473010	PU_ref	Unigene	View CDS
PUT-171a-Arachis_hypogaea-26855	PU_unref	plantGDB	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	135.7	3e-42	11	134	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelv 100 lppGfrFhP+deelv++yL kk ++++ l + +vd++k+ePwd+p+++ + kewyf+++rd+kyat +++ + katgkd+++l+ kg+lv Ahy020949 11 LPPGFRFHPKDEELVCDYLMKKFTHNESLL---MIDVDLNKCEPWDIPETACVGGKEWYFYTQRDRKYATXAAYKQSNGIRILKATGKDRPILR-KGSLV 106 79********************999544...789********7777799**********99988888777789******9.999 PP NAM 101 glkktLvfykgrapkgektdWvmheyrl 128 g++ktLvfy+grapkg+kt+Wvmhe+r+ Ahy020949 107 GMRKTLVFYQGRAPKGRKTEWVMHEFRV 134 **************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	4.58E-50	2	158	IPR003441	NAC domain
PROSITE profile	PS51005	46.837	11	157	IPR003441	NAC domain
Pfam	PF02365	3.3E-21	12	134	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 321 aa Download sequence Send to blast
MSNISLVEAR LPPGFRFHPK DEELVCDYLM KKFTHNESLL MIDVDLNKCE PWDIPETACV 60 GGKEWYFYTQ RDRKYATXAA YKQSNGIRIL KATGKDRPIL RKGSLVGMRK TLVFYQGRAP 120 KGRKTEWVMH EFRVEPPLPP PNTSSKEDWV LCRVFYKNRE VSGKPNSMGS CYDDTGSSSL 180 PALMDSFISF DQQQQPQTHL HADEYEQVPC FSIFSHTQTS PIFNHIMEPK LFPTNNNNNN 240 ATLYGGGGTT TTSNLGSCLD PFSCDRKVLK AVLSQLTNME RNIPNNNNNN TNSIKGSPSL 300 GEGSSESYLS EVGMPNLWNN Y

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
1ut4_A	1e-41	6	158	12	166	NO APICAL MERISTEM PROTEIN
1ut4_B	1e-41	6	158	12	166	NO APICAL MERISTEM PROTEIN
1ut7_A	1e-41	6	158	12	166	NO APICAL MERISTEM PROTEIN
1ut7_B	1e-41	6	158	12	166	NO APICAL MERISTEM PROTEIN
4dul_A	1e-41	6	158	12	166	NAC domain-containing protein 19
4dul_B	1e-41	6	158	12	166	NAC domain-containing protein 19
Search in ModeBase

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator that mediates auxin signaling to promote lateral root development. Activates the expression of two downstream auxin-responsive genes, DBP and AIR3. {ECO:0000269\|PubMed:11114891}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Induced by auxin.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016171234.1	0.0	NAC domain-containing protein 21/22
Refseq	XP_025672523.1	0.0	NAC domain-containing protein 21/22
Swissprot	Q84TE6	1e-112	NAC22_ARATH; NAC domain-containing protein 21/22
TrEMBL	A0A444Y2A1	0.0	A0A444Y2A1_ARAHY; Uncharacterized protein
STRING	XP_007149262.1	1e-168	(Phaseolus vulgaris)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G56010.2	1e-102	NAC domain containing protein 1

Publications ? help Back to Top
Le Hénanff G, et al. Grapevine NAC1 transcription factor as a convergent node in developmental processes, abiotic stresses, and necrotrophic/biotrophic pathogen tolerance. J. Exp. Bot., 2013. 64(16): p. 4877-93 [PMID:24043850] Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Xiao D, et al. SENESCENCE-SUPPRESSED PROTEIN PHOSPHATASE Directly Interacts with the Cytoplasmic Domain of SENESCENCE-ASSOCIATED RECEPTOR-LIKE KINASE and Negatively Regulates Leaf Senescence in Arabidopsis. Plant Physiol., 2015. 169(2): p. 1275-91 [PMID:26304848] Huo X,Wang C,Teng Y,Liu X Identification of miRNAs associated with dark-induced senescence in Arabidopsis. BMC Plant Biol., 2015. 15: p. 266 [PMID:26530097] Chen X, et al. Auxin-Independent NAC Pathway Acts in Response to Explant-Specific Wounding and Promotes Root Tip Emergence during de Novo Root Organogenesis in Arabidopsis. Plant Physiol., 2016. 170(4): p. 2136-45 [PMID:26850273] Liu C,Wang B,Li Z,Peng Z,Zhang J TsNAC1 Is a Key Transcription Factor in Abiotic Stress Resistance and Growth. Plant Physiol., 2018. 176(1): p. 742-756 [PMID:29122985]