PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy020172
Organism
Arachis hypogaea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family TALE
Protein Properties Length: 341aa    MW: 37566.7 Da    PI: 6.0067
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S59548889PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox23.97.3e-082903232154
                HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
   Homeobox  21 knrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                k +yp++e++++L +++gL+ +q+ +WF N+R +
  Ahy020172 290 KWPYPTEEDKARLVQETGLQLKQINNWFINQRKR 323
                469*****************************87 PP
2ELK29.32e-10244265122
        ELK   1 ELKhqLlrKYsgyLgsLkqEFs 22 
                ELKh+L+++Y+++++++++E++
  Ahy020172 244 ELKHELKNGYKEKIVDIREEIL 265
                9*******************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM012552.1E-1980124IPR005540KNOX1
PfamPF037906.4E-1883123IPR005540KNOX1
SMARTSM012569.3E-29132187IPR005541KNOX2
PfamPF037911.5E-21136186IPR005541KNOX2
PfamPF037891.7E-6244265IPR005539ELK domain
PROSITE profilePS512139.69244264IPR005539ELK domain
SMARTSM011887.4E-4244265IPR005539ELK domain
PROSITE profilePS5007111.726264327IPR001356Homeobox domain
SuperFamilySSF466892.82E-16266330IPR009057Homeodomain-like
SMARTSM003892.4E-11266331IPR001356Homeobox domain
CDDcd000867.74E-12267328No hitNo description
Gene3DG3DSA:1.10.10.602.5E-25271328IPR009057Homeodomain-like
PfamPF059208.8E-18284323IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    Send to blast
XATSNANNTN ANSNFLNLHT ASDSAASQPS PWLDATGVNF EPVDLKTGIA NAKGDVAAAV  60
VGDGGGGDGG GGGMVNWQVG RWKAEILAHP LYEQLLSAHV ACLRIATPVD QLPRIDAQLA  120
QSQNVVSKYS AFGHGVGDDK ELDQFMSHYV LLLCSFKEQL QQHVRVHAME AVMACWEIEQ  180
SLQSLTGVSP GEGTGATMSD DEDDQVDSEA NLFDGSLDGT DSMGFGPLIP TENERSLMER  240
VRQELKHELK NGYKEKIVDI REEILRKRRA GKLPGDTTSV LKAWWQSHSK WPYPTEEDKA  300
RLVQETGLQL KQINNWFINQ RKRNWHSNPS SSTVLKSKRK R
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1x2n_A7e-13267331872Homeobox protein PKNOX1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1320340RKRNWHSNPSSSTVLKSKRKR
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025606542.10.0homeobox protein knotted-1-like 3 isoform X2
SwissprotP480001e-179KNAT3_ARATH; Homeobox protein knotted-1-like 3
TrEMBLA0A444YVA10.0A0A444YVA1_ARAHY; Uncharacterized protein
STRINGXP_007136985.10.0(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25220.21e-178KNOTTED1-like homeobox gene 3
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]