PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy020104
Organism
Arachis hypogaea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family HB-PHD
Protein Properties Length: 708aa    MW: 78282.9 Da    PI: 4.979
Description HB-PHD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S59559144PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox413.3e-135796241156
                HHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
   Homeobox  11 qleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                 +e+L + F++n+yp+++++e LA+++gLt +qV+ WF N R   +
  Ahy020104 579 AIERLYKSFKENQYPDRTTKESLAQETGLTLQQVSKWFDNTRWSFR 624
                6899**************************************8766 PP
2PHD37.84.4e-13228283151
                SBTTTSS..TCTTSSEEEBSS.SSSEEETTTSTSSSSHHSHHSS..TBSSHHHHTT CS
        PHD   1 rCkvCgk..sdeegelvlCdg.CkewfHlkClglkleseekpeg..ewlCeeCkek 51 
                +C+ C++    ++++++lCdg C++ fH+ C++++l +e++p g   wlC+ C++k
  Ahy020104 228 FCAKCSSkeLSTNNDIILCDGaCERGFHQLCVDPPLLTENIPPGdeGWLCPGCDCK 283
                699999977777********66********************9999*******985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF579032.02E-13218286IPR011011Zinc finger, FYVE/PHD-type
Gene3DG3DSA:3.30.40.104.0E-12225282IPR013083Zinc finger, RING/FYVE/PHD-type
PROSITE profilePS5001610.78226283IPR019787Zinc finger, PHD-finger
CDDcd155041.40E-27228280No hitNo description
PfamPF006281.4E-10228283IPR019787Zinc finger, PHD-finger
SMARTSM002492.5E-9228281IPR001965Zinc finger, PHD-type
PROSITE patternPS013590229280IPR019786Zinc finger, PHD-type, conserved site
Gene3DG3DSA:1.10.10.601.6E-15556620IPR009057Homeodomain-like
SMARTSM003893.7E-14564630IPR001356Homeobox domain
SuperFamilySSF466891.58E-13564628IPR009057Homeodomain-like
CDDcd000863.67E-13565627No hitNo description
PROSITE profilePS5007113.378566626IPR001356Homeobox domain
PfamPF000469.8E-11579624IPR001356Homeobox domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
GO:0005515Molecular Functionprotein binding
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 708 aa     Download sequence    Send to blast
QNVSVEINNP VTGSLVENQM LSVPTQVNTT SANGLQDPAP ASVDVKNTGL KCSKRNSTAT  60
TSMQLSCKGK KSSKLLKKKY MLRSLGSSDR ALRSRTREKP KPPESNSNLV DANNDGVKNK  120
RGKKKNKKRD GEGVIDEFSR IRARLRYLLK RVSYEQNLID AYSSEGWKGY SLEKLKPEKE  180
LQRAKTEILR RKLKMRDLFR YLDSLCAEGR LPESVFDSEG EIDSEDIFCA KCSSKELSTN  240
NDIILCDGAC ERGFHQLCVD PPLLTENIPP GDEGWLCPGC DCKDDCIELV NDSLGTRLSL  300
EEAGRGFFQK QPVDAFNVDH NSGLPSDDSD DDDYDPDVKE DVEAEGGESS SDESEYASAS  360
EKLEDSGHED QYMGLPSEDS EDDDYNPDAP DQDMKVAEES SSSDFTSDSE DLAATINDNM  420
PPGHGEDITS ASLDDAKKFK GSSKTSKVGK KPSITDELSS LLEADPGQES YTPVSGKRNV  480
ERLDYKKLYD ETYKSDTSDD DEDWNATATP TRKKNVTGKL TPVPPNRKAS NNSTHTLRSD  540
GKAEKTNNSA AKSLEGSGKS GSGEKKPRSS TYNRLGDVAI ERLYKSFKEN QYPDRTTKES  600
LAQETGLTLQ QVSKWFDNTR WSFRHSSHKE PRTGENALAQ TTDNISENEV APGGENRDSE  660
LFPQDVTGEN SKTPSSKKRK GMSEPLASES PQNADKASSH KMKTRKRK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16977KKSSKLLKK
2119127KRGKKKNKK
3188194LRRKLKM
4189195RRKLKMR
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025677044.10.0homeobox protein HAT3.1 isoform X3
TrEMBLA0A445BF390.0A0A445BF39_ARAHY; Uncharacterized protein
STRINGXP_004496910.10.0(Cicer arietinum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19510.14e-86Homeodomain-like protein with RING/FYVE/PHD-type zinc finger domain