PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy019957
Organism
Arachis hypogaea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family C3H
Protein Properties Length: 446aa    MW: 47545.3 Da    PI: 8.8927
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S58442611PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH35.22.1e-113356427
               ---SGGGGTS--TTTTT-SS-SSS CS
    zf-CCCH  4 elCrffartGtCkyGdrCkFaHgp 27
               ++C +++rtG+C yG+rC+++H++
  Ahy019957 33 PNCVYYMRTGYCGYGARCRYNHPR 56
               78********************96 PP
2zf-CCCH40.74.1e-1377101327
                S---SGGGGTS--TTTTT-SS-SSS CS
    zf-CCCH   3 telCrffartGtCkyGdrCkFaHgp 27 
                +++C+++++tGtCk+G++CkF+H++
  Ahy019957  77 EPPCQYYLKTGTCKFGASCKFHHPK 101
                79*********************96 PP
3zf-CCCH36.86.4e-12122146226
                -S---SGGGGTS--TTTTT-SS-SS CS
    zf-CCCH   2 ktelCrffartGtCkyGdrCkFaHg 26 
                ++++C+++++tG+Ck+G +CkF+H+
  Ahy019957 122 GEKECSYYLKTGQCKFGVTCKFHHP 146
                7899********************8 PP
4zf-CCCH35.81.3e-11277303127
                --S---SGGGGTS--TTTTT-SS-SSS CS
    zf-CCCH   1 yktelCrffartGtCkyGdrCkFaHgp 27 
                +++++C+++++tG Ck+G+ C++ H++
  Ahy019957 277 PGQPECQYYLKTGDCKFGSACRYDHPR 303
                5789*********************96 PP
5zf-CCCH331.1e-10322347227
                -S---SGGGGTS--TTTTT-SS-SSS CS
    zf-CCCH   2 ktelCrffartGtCkyGdrCkFaHgp 27 
                +  +C f++++G+Ck+G++CkF H++
  Ahy019957 322 GVQPCAFYLQNGHCKFGSTCKFDHPF 347
                6789********************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003563.0E-62956IPR000571Zinc finger, CCCH-type
PROSITE profilePS5010314.1832957IPR000571Zinc finger, CCCH-type
PfamPF006421.8E-83356IPR000571Zinc finger, CCCH-type
SuperFamilySSF902291.7E-63358IPR000571Zinc finger, CCCH-type
Gene3DG3DSA:4.10.1000.102.1E-53556IPR000571Zinc finger, CCCH-type
PROSITE profilePS5010316.04274102IPR000571Zinc finger, CCCH-type
SMARTSM003562.9E-674101IPR000571Zinc finger, CCCH-type
PfamPF006421.6E-1077101IPR000571Zinc finger, CCCH-type
SuperFamilySSF902295.23E-678101IPR000571Zinc finger, CCCH-type
Gene3DG3DSA:4.10.1000.103.1E-579101IPR000571Zinc finger, CCCH-type
PROSITE profilePS5010313.948120148IPR000571Zinc finger, CCCH-type
SMARTSM003563.0E-5120147IPR000571Zinc finger, CCCH-type
PfamPF006422.0E-9122146IPR000571Zinc finger, CCCH-type
SuperFamilySSF902299.42E-6122147IPR000571Zinc finger, CCCH-type
Gene3DG3DSA:4.10.1000.103.4E-4126145IPR000571Zinc finger, CCCH-type
PROSITE profilePS5010315.788276304IPR000571Zinc finger, CCCH-type
SMARTSM003561.6E-5276303IPR000571Zinc finger, CCCH-type
PfamPF006426.7E-9278303IPR000571Zinc finger, CCCH-type
SuperFamilySSF902293.53E-5281304IPR000571Zinc finger, CCCH-type
Gene3DG3DSA:4.10.1000.108.5E-4282303IPR000571Zinc finger, CCCH-type
PROSITE profilePS5010315.075320348IPR000571Zinc finger, CCCH-type
SMARTSM003561.8E-5320347IPR000571Zinc finger, CCCH-type
PfamPF006422.2E-8322347IPR000571Zinc finger, CCCH-type
SuperFamilySSF902292.88E-6322351IPR000571Zinc finger, CCCH-type
Gene3DG3DSA:4.10.1000.101.5E-4324345IPR000571Zinc finger, CCCH-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 446 aa     Download sequence    Send to blast
XWRSPGPDTG LEESMWQLTL ASSESYPERP SAPNCVYYMR TGYCGYGARC RYNHPRDRAA  60
VAAAVRATGE YPERAGEPPC QYYLKTGTCK FGASCKFHHP KHGGGSLSQA PLNIYGYPLR  120
PGEKECSYYL KTGQCKFGVT CKFHHPAAGT SLPASAPQFY QQVQSPTVPL PDQYGGASTS  180
LRVARPPMLA GSYVQGAYGP VLLSPGVVPF PGWSPYSAPV SPVLSPGAQP AVGATSLYGV  240
TQLSSSTSAF ARPYTPLPSS IGPSGSGQKE EGFPERPGQP ECQYYLKTGD CKFGSACRYD  300
HPRDRGVTRP LLSPIGLPLR PGVQPCAFYL QNGHCKFGST CKFDHPFGPV RYSPSTSSLT  360
DAPVTPYPVG SLLSTLAPSL TSSELRPELM SGSKMESSFS TRMPSSGNSP TTSVSLIFSQ  420
GGTVSLSDVQ LSTQSSAPLS TSRSTR
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015969034.10.0zinc finger CCCH domain-containing protein 32 isoform X1
RefseqXP_016205158.10.0zinc finger CCCH domain-containing protein 32 isoform X1
RefseqXP_025604114.10.0zinc finger CCCH domain-containing protein 32 isoform X1
RefseqXP_025660720.10.0zinc finger CCCH domain-containing protein 32 isoform X1
SwissprotQ84W910.0C3H32_ARATH; Zinc finger CCCH domain-containing protein 32
TrEMBLA0A445CMC00.0A0A445CMC0_ARAHY; Uncharacterized protein
STRINGGLYMA02G17260.10.0(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47850.30.0C3H family protein