PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy019760
Organism
Arachis hypogaea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family GATA
Protein Properties Length: 348aa    MW: 37908.6 Da    PI: 6.3124
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S59556158PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA55.11.1e-17259292134
       GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                C +C  tkTp+WR gp g+ktLCnaCG++y++ +
  Ahy019760 259 CMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGR 292
                99*****************************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PIRSFPIRSF0169921.6E-751340IPR016679Transcription factor, GATA, plant
SMARTSM004012.8E-16253303IPR000679Zinc finger, GATA-type
PROSITE profilePS5011411.846253289IPR000679Zinc finger, GATA-type
SuperFamilySSF577165.7E-15256316No hitNo description
Gene3DG3DSA:3.30.50.101.0E-14257290IPR013088Zinc finger, NHR/GATA-type
CDDcd002022.22E-14258315No hitNo description
PROSITE patternPS003440259284IPR000679Zinc finger, GATA-type
PfamPF003202.4E-15259292IPR000679Zinc finger, GATA-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0008270Molecular Functionzinc ion binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 348 aa     Download sequence    Send to blast
MIEPNFVDDV DCGSFFDHID DLLDFPADDA ATADASLPVA AACAGNIETP ASFWSSESNS  60
GLPATDTAFP RRDAVTDLSA EISVPYEDIV QLEWLSTFVE DSFSGRSLTM KKVELPTTTT  120
TIKEDLTRSQ FRTSSPVSVL ESSSSCSREK VVAQCPEIYI PVVPCGRARS KRQRPSSFKA  180
HPVMQLISPA SSVGENTQPN VILKASSDSE NFAESHPGIK LAKQASGEHK KKKKTKAPNP  240
LTEDDDHDTN QNSAAARKCM HCEITKTPQW RAGPMGPKTL CNACGVRYKS GRLFPEYRPA  300
ASPTFCPAVH SNSHKKVLEM RNKFGFSTDS AASPELIPNT SRLGLEYM
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016204506.10.0GATA transcription factor 8 isoform X1
RefseqXP_016204507.10.0GATA transcription factor 8 isoform X2
RefseqXP_025657178.10.0GATA transcription factor 8 isoform X1
RefseqXP_025657179.10.0GATA transcription factor 8 isoform X2
TrEMBLA0A444XBI90.0A0A444XBI9_ARAHY; GATA transcription factor
STRINGGLYMA02G08145.21e-155(Glycine max)