PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy019736
Organism
Arachis hypogaea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family GRAS
Protein Properties Length: 230aa    MW: 26082.7 Da    PI: 5.1781
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S59526377PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS235.13.1e-721214158373
       GRAS 158 leetgerLakfAeelgvpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerf 257
                l+etg+rLa fAe+l++pfef+  v++rled++l++L+vk++E++aVn+v+qlh++l +      + +++L l++s++P +vvv+eqea+hn+ ++ +r+
  Ahy019736   1 LNETGDRLAGFAEALNLPFEFHG-VVDRLEDVRLWMLHVKENETVAVNCVFQLHKTLYDVNG-G-ALRDFLGLIRSTNPAMVVVAEQEAEHNDMRLEARV 97 
                689********************.7*******************************944333.2.4689******************************* PP

       GRAS 258 lealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerl.eeaGFkpvplsekaakqaklllrkvksdgyrveeesg 356
                +++l+yysalfds+e  l  +s++r+k+E++ +grei+n+vaceg++r erhe ++kWr+++ e+ GF+ ++++e++  q +ll+++++ d y+v ++s 
  Ahy019736  98 CNSLKYYSALFDSVEHCLEGDSSARRKIEEM-FGREIRNIVACEGSDRLERHEGFGKWRKMMvEQGGFRCLSVTERERVQSQLLMKMYPCDSYSVRNHSS 196
                *******************************.****************************9934589**********************999****8866 PP

       GRAS 357 slv.lgWkdrpLvsvSaW 373
                +++ l+W+d pL++vSaW
  Ahy019736 197 EALsLCWMDIPLFTVSAW 214
                6666************** PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF035141.1E-691214IPR005202Transcription factor GRAS
PROSITE profilePS5098527.8641194IPR005202Transcription factor GRAS
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    Send to blast
LNETGDRLAG FAEALNLPFE FHGVVDRLED VRLWMLHVKE NETVAVNCVF QLHKTLYDVN  60
GGALRDFLGL IRSTNPAMVV VAEQEAEHND MRLEARVCNS LKYYSALFDS VEHCLEGDSS  120
ARRKIEEMFG REIRNIVACE GSDRLERHEG FGKWRKMMVE QGGFRCLSVT ERERVQSQLL  180
MKMYPCDSYS VRNHSSEALS LCWMDIPLFT VSAWAPLDAA GTSSSVSQPI
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5b3g_A2e-321216172380Protein SCARECROW
5b3h_A2e-321216171379Protein SCARECROW
5b3h_D2e-321216171379Protein SCARECROW
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor involved in plant development. {ECO:0000250}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020978726.11e-168scarecrow-like protein 28
RefseqXP_020978727.11e-168scarecrow-like protein 28
RefseqXP_025653598.11e-168scarecrow-like protein 28
RefseqXP_025653599.11e-168scarecrow-like protein 28
SwissprotQ9CAN39e-91SCL28_ARATH; Scarecrow-like protein 28
TrEMBLA0A444WQZ71e-167A0A444WQZ7_ARAHY; Uncharacterized protein
TrEMBLA0A444Z9571e-166A0A444Z957_ARAHY; Uncharacterized protein
STRINGXP_004515801.11e-123(Cicer arietinum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G63100.14e-93GRAS family protein