PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ahy019284 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | ZF-HD | ||||||||
Protein Properties | Length: 280aa MW: 31453.4 Da PI: 8.2085 | ||||||||
Description | ZF-HD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | ZF-HD_dimer | 99.9 | 1.9e-31 | 68 | 122 | 4 | 59 |
ZF-HD_dimer 4 vrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrevee 59 vrY+eClkNhAa++Gg+a+DGCgEfmps g++gt++al+C+AC CHRnFHR+e + Ahy019284 68 VRYRECLKNHAAAMGGNATDGCGEFMPS-GDHGTMEALTCSACRCHRNFHRKEIQG 122 89*************************9.889********************9876 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04770 | 7.7E-28 | 68 | 120 | IPR006456 | ZF-HD homeobox protein, Cys/His-rich dimerisation domain |
ProDom | PD125774 | 3.0E-24 | 68 | 126 | IPR006456 | ZF-HD homeobox protein, Cys/His-rich dimerisation domain |
TIGRFAMs | TIGR01566 | 1.8E-29 | 69 | 120 | IPR006456 | ZF-HD homeobox protein, Cys/His-rich dimerisation domain |
PROSITE profile | PS51523 | 27.049 | 70 | 119 | IPR006456 | ZF-HD homeobox protein, Cys/His-rich dimerisation domain |
SuperFamily | SSF46689 | 7.96E-19 | 196 | 269 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 4.2E-30 | 196 | 270 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01565 | 1.0E-26 | 208 | 264 | IPR006455 | Homeodomain, ZF-HD class |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 280 aa Download sequence Send to blast |
MELSSQEGDI PIAVNTTANY GGNGHGAHIN IHHTQNPSNG SSMHPLDNGP YNSKQEEEEE 60 EEVVVPLVRY RECLKNHAAA MGGNATDGCG EFMPSGDHGT MEALTCSACR CHRNFHRKEI 120 QGEPSAPPPP LLEYHHHHFN TATRHLAASR KFLHKNMHHH HHLGYPTAGG GNILPSRTVP 180 PAQMIMPYNI GPMPSSEHSD EQDERVKKKR FRTKFSQEQK EKMLAFAEKV GWKIQKQEDS 240 VVQNFCNEIG VKRRVLKVWM HNNKHNLAKK NLLIIPPSSS |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1wh7_A | 8e-24 | 209 | 266 | 18 | 75 | ZF-HD homeobox family protein |
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Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Putative transcription factor. Probably involved in the regulation of floral induction. {ECO:0000269|PubMed:22319055}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced by exposure to long days. {ECO:0000269|PubMed:22319055}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_025614184.1 | 0.0 | zinc-finger homeodomain protein 4 | ||||
Refseq | XP_025629669.1 | 0.0 | zinc-finger homeodomain protein 4 | ||||
Swissprot | Q9M9S0 | 5e-70 | ZHD4_ARATH; Zinc-finger homeodomain protein 4 | ||||
TrEMBL | A0A445AYH0 | 0.0 | A0A445AYH0_ARAHY; Uncharacterized protein | ||||
STRING | XP_007154109.1 | 2e-95 | (Phaseolus vulgaris) |