PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy018947
Organism
Arachis hypogaea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family MYB
Protein Properties Length: 326aa    MW: 37127.8 Da    PI: 6.796
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S59529047PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding24.27.7e-084893346
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqk 46
                     +WT++E +++ +a +++ ++   +W ++a++++ g+t  +++  ++ 
        Ahy018947 48 KWTPQENKQFENALALFDKEtpdRWLKVAAMIP-GKTVGDVIKQYRE 93
                     8*****************99*************.*******999986 PP
2Myb_DNA-binding33.41.1e-10161201747
                      HHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   7 eEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       E+ l++ + k++G+g+W+ I+r + ++Rt+ q+ s+ qky
        Ahy018947 161 XEHRLFLMGLKKYGKGDWRNISRNFVTTRTPTQVASHAQKY 201
                      59**************************************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129310.1824499IPR017884SANT domain
SMARTSM007174.8E-94597IPR001005SANT/Myb domain
SuperFamilySSF466891.79E-1147103IPR009057Homeodomain-like
PfamPF002491.1E-64894IPR001005SANT/Myb domain
CDDcd001675.79E-74895No hitNo description
Gene3DG3DSA:1.10.10.602.5E-9147207IPR009057Homeodomain-like
PROSITE profilePS5129415.546149206IPR017930Myb domain
SuperFamilySSF466891.72E-13150205IPR009057Homeodomain-like
TIGRFAMsTIGR015572.3E-14152205IPR006447Myb domain, plants
SMARTSM007172.1E-7153204IPR001005SANT/Myb domain
CDDcd001671.14E-7156202No hitNo description
PfamPF002495.0E-8161201IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    Send to blast
XELLCMYATI AYSLLEEEEE MNRGIEVLSP ASYLHNSNWL FQESAGTKWT PQENKQFENA  60
LALFDKETPD RWLKVAAMIP GKTVGDVIKQ YRELVEDVNV IESGFIPIPG GTTDGSFTLE  120
WVDNHEFDGF KQFYGVGCKR GSSTRPSEQE RKKGVPWTXX XEHRLFLMGL KKYGKGDWRN  180
ISRNFVTTRT PTQVASHAQK YFIRQLNGGK DKRRSSIHDI TMVNLPETKS PSSESNKPPS  240
PDANLNQNQK LLSSMVKQEY DWKSPPYEGV PLVFDSTNGN SFMTPLCGAS SYGSKPQEQY  300
LLRGTFHGFQ FGPYDTFMQM QPMQPQ
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2cjj_A3e-1645115777RADIALIS
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtInvolved in the dorsovental asymmetry of flowers. Promotes ventral identity. {ECO:0000269|PubMed:11937495, ECO:0000269|PubMed:9118809}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015950297.10.0transcription factor DIVARICATA
SwissprotQ8S9H71e-113DIV_ANTMA; Transcription factor DIVARICATA
TrEMBLA0A445AK090.0A0A445AK09_ARAHY; Uncharacterized protein
STRINGGLYMA03G14440.11e-168(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38090.11e-109MYB family protein
Publications ? help Back to Top
  1. Galego L,Almeida J
    Role of DIVARICATA in the control of dorsoventral asymmetry in Antirrhinum flowers.
    Genes Dev., 2002. 16(7): p. 880-91
    [PMID:11937495]
  2. Almeida J,Rocheta M,Galego L
    Genetic control of flower shape in Antirrhinum majus.
    Development, 1997. 124(7): p. 1387-92
    [PMID:9118809]