PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ahy018623
Organism
Arachis hypogaea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family SRS
Protein Properties Length: 285aa    MW: 31076.4 Da    PI: 8.1355
Description SRS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Ahy#S59555990PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF702172.81.7e-53902386154
     DUF702   6 asCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasaaeaaskrkrelkskkqsalsstklssae...skkelet 102
                  C dCGn+akkdC+++RCR CCk rg+dC+thv+stWvpa krrer+ + +     +aa+++   +k+++   s ++++ s+t+++s +   ++    +
  Ahy018623  90 RVCTDCGNRAKKDCVYRRCRSCCKGRGYDCTTHVRSTWVPALKRRERHVAVTGGVGGEAANKR---TKNNNGCASGSATSHSHTSTNSDScysHQDARFK 186
                47*********************************************8777776655555443...3333333333334444444333320002333344 PP

     DUF702 103 sslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154
                +slP +v+++avfrc rvs+v +ge+e+aY ++v+i+Ghvf+G+Lyd+G++ 
  Ahy018623 187 ESLPGHVRAPAVFRCHRVSTVGNGENEFAYLATVHISGHVFRGFLYDHGVDP 238
                56***********************************************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
TIGRFAMsTIGR016234.8E-2491133IPR006510Zinc finger, lateral root primordium type 1
PfamPF051429.0E-5291237IPR007818Protein of unknown function DUF702
TIGRFAMsTIGR016241.2E-22189236IPR006511Lateral Root Primordium type 1, C-terminal
Sequence ? help Back to Top
Protein Sequence    Length: 285 aa     Download sequence    Send to blast
MSMLGLTDLV FIAPNPSSLH HHRQQQLIST ENDNNNSNNN PLSVGFGIFP LLAATPCVQV  60
VQNQSNEEAM EDSGKKKKKI DEDENGGEFR VCTDCGNRAK KDCVYRRCRS CCKGRGYDCT  120
THVRSTWVPA LKRRERHVAV TGGVGGEAAN KRTKNNNGCA SGSATSHSHT STNSDSCYSH  180
QDARFKESLP GHVRAPAVFR CHRVSTVGNG ENEFAYLATV HISGHVFRGF LYDHGVDPKN  240
TIMPSYASEL QLGNNCISNG KNKECSSSAI GVTTNEYDNL YSASA
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025624841.10.0protein LATERAL ROOT PRIMORDIUM 1
TrEMBLA0A445B1830.0A0A445B183_ARAHY; Uncharacterized protein
STRINGGLYMA04G17885.12e-98(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G12330.25e-42Lateral root primordium (LRP) protein-related